RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 GCOM1H8Y6P7 765 aaPredicted RBP16.09■□□□□ 0.17
DDR1-260ENST00000507533 PPP1R11O60927 126 aaPredicted RBP16.09■□□□□ 0.17
DDR1-260ENST00000507533 POLR2MP0CAP2 368 aa16.09■□□□□ 0.17
DDR1-260ENST00000507533 STAG3L1P0CL83 205 aa16.09■□□□□ 0.17
DDR1-260ENST00000507533 SP100P23497 879 aaPredicted RBP16.09■□□□□ 0.17
DDR1-260ENST00000507533 CD52P31358 61 aa16.09■□□□□ 0.17
DDR1-260ENST00000507533 DUSP6Q16828 381 aa16.09■□□□□ 0.17
DDR1-260ENST00000507533 FRMD5Q7Z6J6 570 aa16.09■□□□□ 0.17
DDR1-260ENST00000507533 ADSSL1Q8N142 457 aa16.09■□□□□ 0.17
DDR1-260ENST00000507533 TMEM105Q8N8V8 129 aa16.09■□□□□ 0.17
DDR1-260ENST00000507533 KREMEN2Q8NCW0 462 aa16.09■□□□□ 0.17
DDR1-260ENST00000507533 DNAJB3Q8WWF6 145 aa16.09■□□□□ 0.17
DDR1-260ENST00000507533 NKD2Q969F2 451 aaPredicted RBP16.09■□□□□ 0.17
DDR1-260ENST00000507533 CDCA3Q99618 268 aaPredicted RBP16.09■□□□□ 0.17
DDR1-260ENST00000507533 S1PR5Q9H228 398 aa16.09■□□□□ 0.17
DDR1-260ENST00000507533 AGO3Q9H9G7 860 aaKnown RBP16.09■□□□□ 0.17
DDR1-260ENST00000507533 CDY2AQ9Y6F7 541 aa16.09■□□□□ 0.17
DDR1-260ENST00000507533 FSD2A1L4K1 749 aa16.08■□□□□ 0.16
DDR1-260ENST00000507533 GATMP50440 423 aa16.08■□□□□ 0.16
DDR1-260ENST00000507533 SP4Q02446 784 aa16.08■□□□□ 0.16
DDR1-260ENST00000507533 SEMA3FQ13275 785 aa16.08■□□□□ 0.16
DDR1-260ENST00000507533 ZNF589Q86UQ0 364 aaPredicted RBP16.08■□□□□ 0.16
DDR1-260ENST00000507533 UBALD2Q8IYN6 164 aa16.08■□□□□ 0.16
DDR1-260ENST00000507533 ZSCAN10Q96SZ4 725 aaPredicted RBP16.08■□□□□ 0.16
DDR1-260ENST00000507533 FTHL17Q9BXU8 183 aa16.08■□□□□ 0.16
DDR1-260ENST00000507533 DCHS1Q96JQ0 3298 aa16.08■□□□□ 0.16
DDR1-260ENST00000507533 ZBTB5O15062 677 aa16.07■□□□□ 0.16
DDR1-260ENST00000507533 SRGAP2BP0DMP2 458 aa16.07■□□□□ 0.16
DDR1-260ENST00000507533 TECP42680 631 aa16.07■□□□□ 0.16
DDR1-260ENST00000507533 MRPS9P82933 396 aaKnown RBP16.07■□□□□ 0.16
DDR1-260ENST00000507533 UBE3AQ05086 875 aa16.07■□□□□ 0.16
DDR1-260ENST00000507533 PPFIA1Q13136 1202 aa16.07■□□□□ 0.16
DDR1-260ENST00000507533 STAG2Q8N3U4 1231 aa16.07■□□□□ 0.16
DDR1-260ENST00000507533 ENAHQ8N8S7 591 aaPredicted RBP16.07■□□□□ 0.16
DDR1-260ENST00000507533 MTMR8Q96EF0 704 aa16.07■□□□□ 0.16
DDR1-260ENST00000507533 INPP4AQ96PE3 977 aaPredicted RBP16.07■□□□□ 0.16
DDR1-260ENST00000507533 APOL5Q9BWW9 433 aa16.07■□□□□ 0.16
DDR1-260ENST00000507533 RTEL1Q9NZ71 1219 aa16.07■□□□□ 0.16
DDR1-260ENST00000507533 TUBE1Q9UJT0 475 aa16.07■□□□□ 0.16
DDR1-260ENST00000507533 PCDHB12Q9Y5F1 795 aa16.07■□□□□ 0.16
DDR1-260ENST00000507533 RIF1Q5UIP0 2472 aaKnown RBP16.07■□□□□ 0.16
DDR1-260ENST00000507533 VPS13AQ96RL7 3174 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 TTC3P53804 2025 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 ZNF213O14771 459 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 FIBPO43427 364 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 STAM2O75886 525 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 SCG2P13521 617 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 NT5C2P49902 561 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 ERVFC1P60507 584 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 MRPS6P82932 125 aaKnown RBP16.06■□□□□ 0.16
DDR1-260ENST00000507533 MTMR3Q13615 1198 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 GRIK4Q16099 956 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 SPOUT1Q5T280 376 aaKnown RBP16.06■□□□□ 0.16
DDR1-260ENST00000507533 MCTP2Q6DN12 878 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 ANKRD54Q6NXT1 300 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 TMEM184AQ6ZMB5 413 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 LRFN2Q9ULH4 789 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 SORCS3Q9UPU3 1222 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 NR2E1Q9Y466 385 aa16.06■□□□□ 0.16
DDR1-260ENST00000507533 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
DDR1-260ENST00000507533 BRD1O95696 1058 aa16.05■□□□□ 0.16
DDR1-260ENST00000507533 IBSPP21815 317 aaPredicted RBP16.05■□□□□ 0.16
DDR1-260ENST00000507533 NMIQ13287 307 aaPredicted RBP16.05■□□□□ 0.16
DDR1-260ENST00000507533 ASTLQ6HA08 431 aaPredicted RBP16.05■□□□□ 0.16
DDR1-260ENST00000507533 PDE12Q6L8Q7 609 aaKnown RBP16.05■□□□□ 0.16
DDR1-260ENST00000507533 SYCE2Q6PIF2 218 aa16.05■□□□□ 0.16
DDR1-260ENST00000507533 AAASQ9NRG9 546 aa16.05■□□□□ 0.16
DDR1-260ENST00000507533 PADI3Q9ULW8 664 aa16.05■□□□□ 0.16
DDR1-260ENST00000507533 SQORQ9Y6N5 450 aa16.05■□□□□ 0.16
DDR1-260ENST00000507533 SALL3Q9BXA9 1300 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 MBLAC1A4D2B0 266 aaPredicted RBP16.04■□□□□ 0.16
DDR1-260ENST00000507533 B4E1Z4 1266 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 FGF18O76093 207 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 MARK3P27448 753 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 TCF7P36402 384 aaPredicted RBP16.04■□□□□ 0.16
DDR1-260ENST00000507533 TRAF1Q13077 416 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 KCNC3Q14003 757 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 MARCH8Q5T0T0 291 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 IER5Q5VY09 327 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 LLGL2Q6P1M3 1020 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 HOMER1Q86YM7 354 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 SENP7Q9BQF6 1050 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 FAM49AQ9H0Q0 323 aaPredicted RBP16.04■□□□□ 0.16
DDR1-260ENST00000507533 TMEM260Q9NX78 707 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 FAM186AA6NE01 2351 aa16.04■□□□□ 0.16
DDR1-260ENST00000507533 FSCN2O14926 492 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 RPLP2P05387 115 aaKnown RBP16.03■□□□□ 0.16
DDR1-260ENST00000507533 IGBP1P78318 339 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 PAK2Q13177 524 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 PLPP4Q5VZY2 271 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 THNSL1Q8IYQ7 743 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 ZBTB10Q96DT7 871 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 MFSD1Q9H3U5 465 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 SMOC2Q9H3U7 446 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 ERAP1Q9NZ08 941 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 ZSWIM5Q9P217 1185 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 MAD2L2Q9UI95 211 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 PCDHB7Q9Y5E2 793 aa16.03■□□□□ 0.16
DDR1-260ENST00000507533 TRPV2Q9Y5S1 764 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms