RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ZNF579Q8NAF0 562 aaKnown RBP9.52□□□□□ -0.89
PDGFC-205ENST00000506880 CAGE1Q8TC20 777 aa9.52□□□□□ -0.89
PDGFC-205ENST00000506880 KCNG4Q8TDN1 519 aa9.52□□□□□ -0.89
PDGFC-205ENST00000506880 C16orf70Q9BSU1 422 aa9.52□□□□□ -0.89
PDGFC-205ENST00000506880 POLR3CQ9BUI4 534 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-205ENST00000506880 SCAND2PQ9GZW5 306 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-205ENST00000506880 NT5C3AQ9H0P0 336 aa9.52□□□□□ -0.89
PDGFC-205ENST00000506880 ZSWIM4Q9H7M6 989 aa9.52□□□□□ -0.89
PDGFC-205ENST00000506880 NRBP2Q9NSY0 501 aa9.52□□□□□ -0.89
PDGFC-205ENST00000506880 TCHHQ07283 1943 aa9.52□□□□□ -0.89
PDGFC-205ENST00000506880 GSTTP1A0A1W2PQM5 241 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 POTEFA5A3E0 1075 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 SLC37A4O43826 429 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 ATP9AO75110 1047 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 PPFIA3O75145 1194 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 F13A1P00488 732 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 PFKMP08237 780 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 RPA1P27694 616 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 DDIT3P35638 169 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 QARSP47897 775 aaKnown RBP9.51□□□□□ -0.89
PDGFC-205ENST00000506880 GUCY1B3Q02153 619 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 SPIRE1Q08AE8 756 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 PTGDRQ13258 359 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 XKR3Q5GH77 459 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 MIER3Q7Z3K6 550 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 NME8Q8N427 588 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 C4orf32Q8N8J7 132 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 CYP2W1Q8TAV3 490 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 ATP8B4Q8TF62 1192 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 HAS1Q92839 578 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 PGBD1Q96JS3 809 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 TIPINQ9BVW5 301 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 TTC12Q9H892 705 aaPredicted RBP9.51□□□□□ -0.89
PDGFC-205ENST00000506880 ZNF302Q9NR11 478 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 GJB4Q9NTQ9 266 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 KCND2Q9NZV8 630 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 GTF2IRD1Q9UHL9 959 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 VAV3Q9UKW4 847 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 SQORQ9Y6N5 450 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 PHLPP2Q6ZVD8 1323 aa9.51□□□□□ -0.89
PDGFC-205ENST00000506880 DNAH12Q6ZR08 3092 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 TRIP12Q14669 1992 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-205ENST00000506880 MBLAC1A4D2B0 266 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-205ENST00000506880 KIF28PB7ZC32 967 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 EN2P19622 333 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-205ENST00000506880 ABCD1P33897 745 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 MCM7P33993 719 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 RFC2P35250 354 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 TXLNAP40222 546 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 PSEN2P49810 448 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 TOB1P50616 345 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-205ENST00000506880 PTK7Q13308 1070 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 BFSP2Q13515 415 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 MFSD10Q14728 455 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 SLC39A14Q15043 492 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 PCBP1Q15365 356 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDGFC-205ENST00000506880 EARS2Q5JPH6 523 aaKnown RBP9.5□□□□□ -0.89
PDGFC-205ENST00000506880 ODR4Q5SWX8 454 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 HYIQ5T013 277 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 GJC2Q5T442 439 aaPredicted RBP9.5□□□□□ -0.89
PDGFC-205ENST00000506880 ANO1Q5XXA6 986 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 RSPH3Q86UC2 560 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 C7orf31Q8N865 590 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 GLG1Q92896 1179 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 PAWRQ96IZ0 340 aaKnown RBP9.5□□□□□ -0.89
PDGFC-205ENST00000506880 HSD17B14Q9BPX1 270 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 NIFKQ9BYG3 293 aaKnown RBP9.5□□□□□ -0.89
PDGFC-205ENST00000506880 ANKEF1Q9NU02 776 aa9.5□□□□□ -0.89
PDGFC-205ENST00000506880 SRPRBQ9Y5M8 271 aaKnown RBP9.5□□□□□ -0.89
PDGFC-205ENST00000506880 EVPLQ92817 2033 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 ALPK3Q96L96 1907 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 POTEB3A0JP26 581 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 BACH1O14867 736 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 KIAA0355O15063 1070 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 CD4P01730 458 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 MYL3P08590 195 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 TMOD1P28289 359 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 RFC5P40937 340 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 KRT85P78386 507 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 ADAM17P78536 824 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 KIAA0753Q2KHM9 967 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 KRT79Q5XKE5 535 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 PDXDC2PQ6P474 469 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 POTEBQ6S5H4 581 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 CXCL17Q6UXB2 119 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 FAM126BQ8IXS8 530 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 USP38Q8NB14 1042 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 RETREG2Q8NC44 543 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 RSPH1Q8WYR4 309 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 KAT2BQ92831 832 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 COPS5Q92905 334 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 CCDC34Q96HJ3 373 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 NACC1Q96RE7 527 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 CCSER1Q9C0I3 900 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 SENP6Q9GZR1 1112 aaPredicted RBP9.49□□□□□ -0.89
PDGFC-205ENST00000506880 UNC45AQ9H3U1 944 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 CUEDC2Q9H467 287 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 MAGEF1Q9HAY2 307 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 PRKAG2Q9UGJ0 569 aa9.49□□□□□ -0.89
PDGFC-205ENST00000506880 DBR1Q9UK59 544 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms