RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 DEFB128Q7Z7B8 93 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 CRYGNQ8WXF5 182 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 SLC9A7Q96T83 725 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 GPR20Q99678 358 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 SDF4Q9BRK5 362 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 AGO4Q9HCK5 861 aaKnown RBP14.9□□□□□ -0.02
TCOF1-209ENST00000506630 JPH1Q9HDC5 661 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-209ENST00000506630 TELO2Q9Y4R8 837 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 ARIH1Q9Y4X5 557 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-209ENST00000506630 GBF1Q92538 1859 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 KIF28PB7ZC32 967 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 FAM86B1E9PN63 330 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 M0R2N6 131 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 RFXAPO00287 272 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 MEIS1O00470 390 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 FAM86B2P0C5J1 330 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 PRR16Q569H4 304 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 NIPA1Q7RTP0 329 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 TBCKQ8TEA7 893 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 CERS4Q9HA82 394 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 NOD1Q9Y239 953 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 BDP1A6H8Y1 2624 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 NFASCO94856 1347 aa14.89□□□□□ -0.03
TCOF1-209ENST00000506630 IGLV3-22A0A075B6J6 115 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 CCDC194A0A1B0GVG4 234 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 DDX39AO00148 427 aaKnown RBP14.88□□□□□ -0.03
TCOF1-209ENST00000506630 RFC2P35250 354 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 KRT2P35908 639 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 TCF7P36402 384 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-209ENST00000506630 PTPN11Q06124 597 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-209ENST00000506630 TRIM29Q14134 588 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 NONOQ15233 471 aaKnown RBP eCLIP14.88□□□□□ -0.03
TCOF1-209ENST00000506630 KRT25Q7Z3Z0 450 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 TRIM50Q86XT4 487 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 C7orf31Q8N865 590 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 RETREG2Q8NC44 543 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 PHOSPHO2Q8TCD6 241 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 ARNTL2Q8WYA1 636 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 UIMC1Q96RL1 719 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 LLPHQ9BRT6 129 aaKnown RBP14.88□□□□□ -0.03
TCOF1-209ENST00000506630 C16orf70Q9BSU1 422 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 LRFN3Q9BTN0 628 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 BRMS1Q9HCU9 246 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 HDAC6Q9UBN7 1215 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 SLC9A2Q9UBY0 812 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 ZNF215Q9UL58 517 aaPredicted RBP14.88□□□□□ -0.03
TCOF1-209ENST00000506630 EVPLQ92817 2033 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 LOXHD1Q8IVV2 1947 aa14.88□□□□□ -0.03
TCOF1-209ENST00000506630 CHD9Q3L8U1 2897 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 H3BRB1 525 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 HAS3O00219 553 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 CD2BP2O95400 341 aaKnown RBP14.87□□□□□ -0.03
TCOF1-209ENST00000506630 CIITAP33076 1130 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 ITGB3BPQ13352 177 aaPredicted RBP14.87□□□□□ -0.03
TCOF1-209ENST00000506630 INF2Q27J81 1249 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 TMEM31Q5JXX7 168 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 OXER1Q8TDS5 423 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 SEPT1Q8WYJ6 367 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 HLA-CQ95604 372 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 CTAGE1Q96RT6 745 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 ZNF577Q9BSK1 485 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 FTOQ9C0B1 505 aaKnown RBP eCLIP14.87□□□□□ -0.03
TCOF1-209ENST00000506630 EPHX3Q9H6B9 360 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 TUT1Q9H6E5 874 aaKnown RBP14.87□□□□□ -0.03
TCOF1-209ENST00000506630 GTF2IRD1Q9UHL9 959 aa14.87□□□□□ -0.03
TCOF1-209ENST00000506630 TET1Q8NFU7 2136 aa14.86□□□□□ -0.03
TCOF1-209ENST00000506630 GSTTP1A0A1W2PQM5 241 aa14.86□□□□□ -0.03
TCOF1-209ENST00000506630 PITPNM1O00562 1244 aa14.86□□□□□ -0.03
TCOF1-209ENST00000506630 USP11P51784 963 aa14.86□□□□□ -0.03
TCOF1-209ENST00000506630 HMGN5P82970 282 aaKnown RBP14.86□□□□□ -0.03
TCOF1-209ENST00000506630 HIC1Q14526 733 aa14.86□□□□□ -0.03
TCOF1-209ENST00000506630 PTGISQ16647 500 aa14.86□□□□□ -0.03
TCOF1-209ENST00000506630 GDF6Q6KF10 455 aaPredicted RBP14.86□□□□□ -0.03
TCOF1-209ENST00000506630 PIK3AP1Q6ZUJ8 805 aa14.86□□□□□ -0.03
TCOF1-209ENST00000506630 SESTD1Q86VW0 696 aa14.86□□□□□ -0.03
TCOF1-209ENST00000506630 FAM184AQ8NB25 1140 aa14.86□□□□□ -0.03
TCOF1-209ENST00000506630 TCEAL9Q9UHQ7 104 aa14.86□□□□□ -0.03
TCOF1-209ENST00000506630 IPO5O00410 1097 aaKnown RBP14.85□□□□□ -0.03
TCOF1-209ENST00000506630 TLL1O43897 1013 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 TDP2O95551 362 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 MMP1P03956 469 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 IQCF3P0C7M6 154 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 MCM2P49736 904 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 ACTR2P61160 394 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 GUCY1B3Q02153 619 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 TAP1Q03518 808 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 NR5A1Q13285 461 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 KRT40Q6A162 431 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 HERC6Q8IVU3 1022 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 GLG1Q92896 1179 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 LENG9Q96B70 501 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 C8orf76Q96K31 380 aa14.85□□□□□ -0.03
TCOF1-209ENST00000506630 TCF20Q9UGU0 1960 aaKnown RBP14.85□□□□□ -0.03
TCOF1-209ENST00000506630 C17orf102A2RUQ5 167 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 EPOPA6NHQ4 379 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 MSH4O15457 936 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 EDIL3O43854 480 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 SMIM10L2AP0DMW4 78 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 SMIM10L2BP0DMW5 78 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 MARK3P27448 753 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms