RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 HDAC1Q13547 482 aaPredicted RBP5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 FAM50AQ14320 339 aaKnown RBP5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 PPP2R5AQ15172 486 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 TTF1Q15361 905 aaPredicted RBP5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 EMC4Q5J8M3 183 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 LBX2Q6XYB7 198 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 ETV3LQ6ZN32 361 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 STRA8Q7Z7C7 330 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 RNF180Q86T96 592 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 DCAF4Q8WV16 495 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 SORCS2Q96PQ0 1159 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 RPS6KC1Q96S38 1066 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 DHRS4Q9BTZ2 278 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 NCOA5Q9HCD5 579 aaKnown RBP5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 ZNF652Q9Y2D9 606 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 COA3Q9Y2R0 106 aaPredicted RBP5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 MRPS23Q9Y3D9 190 aaKnown RBP5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 TRAF6Q9Y4K3 522 aa5.25□□□□□ -1.57
SMARCAD1-205ENST00000506089 TCRBV5S2A0A599 114 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 HGSO14964 777 aaPredicted RBP5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 C6orf222P0C671 652 aaPredicted RBP5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 GNALP38405 381 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 GUCY2FP51841 1108 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 SLURP1P55000 103 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 SMAD4Q13485 552 aaKnown RBP5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 UBE4AQ14139 1066 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 CR1LQ2VPA4 569 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 STEAP3Q658P3 488 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 STYK1Q6J9G0 422 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 RSPO2Q6UXX9 243 aaPredicted RBP5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 LIPIQ6XZB0 460 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 DDX46Q7L014 1031 aaKnown RBP5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 FAM126BQ8IXS8 530 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 RBM12BQ8IXT5 1001 aaKnown RBP5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 AHI1Q8N157 1196 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 LINC00482Q8N8I6 264 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 PIP4K2CQ8TBX8 421 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 CDC6Q99741 560 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 MRPL4Q9BYD3 311 aaKnown RBP5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 EPB41L1Q9H4G0 881 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 INTS7Q9NVH2 962 aaKnown RBP5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 WASF3Q9UPY6 502 aa5.24□□□□□ -1.57
SMARCAD1-205ENST00000506089 TRBV23-1A0A0A0MS06 115 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 SH3D21A4FU49 640 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 GSG1L2A8MUP6 293 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 KRT18P05783 430 aaKnown RBP5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 COL6A2P12110 1019 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 MAGEA10P43363 369 aaPredicted RBP5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 GPR85P60893 370 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 UBXN11Q5T124 520 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 CNNM4Q6P4Q7 775 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 CD300LDQ6UXZ3 194 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 LHFPL2Q6ZUX7 228 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 AFAP1L2Q8N4X5 818 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 SLC7A14Q8TBB6 771 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 TSR2Q969E8 191 aaKnown RBP5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 ZBTB8AQ96BR9 441 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 SPATA25Q9BR10 227 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 C11orf84Q9BUA3 381 aaPredicted RBP5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 MENTQ9BUN1 341 aa5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 TARS2Q9BW92 718 aaKnown RBP5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 SCAND2PQ9GZW5 306 aaPredicted RBP5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 CNOT11Q9UKZ1 510 aaKnown RBP5.23□□□□□ -1.57
SMARCAD1-205ENST00000506089 CREB3O43889 395 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 NPTXRO95502 500 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 LRG1P02750 347 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 LTFP02788 710 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 CYP2C8P10632 490 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 GRK2P25098 689 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 GRK3P35626 688 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 HMGA2P52926 109 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 ITGA1P56199 1179 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 ADAM17P78536 824 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 MAP9Q49MG5 647 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 ZFYVE27Q5T4F4 411 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 NECAB2Q7Z6G3 386 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 FGD2Q7Z6J4 655 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 SCUBE1Q8IWY4 988 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 IFNL3Q8IZI9 196 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 PPM1KQ8N3J5 372 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 KCNJ15Q99712 375 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 IPPKQ9H8X2 491 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 MYOTQ9UBF9 498 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 RBPJLQ9UBG7 517 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 ASH2LQ9UBL3 628 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 TELO2Q9Y4R8 837 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 PCDHB4Q9Y5E5 795 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 COMMD10Q9Y6G5 202 aa5.22□□□□□ -1.57
SMARCAD1-205ENST00000506089 E2F8A0AVK6 867 aa5.21□□□□□ -1.58
SMARCAD1-205ENST00000506089 HMGB1P1B2RPK0 211 aaPredicted RBP5.21□□□□□ -1.58
SMARCAD1-205ENST00000506089 SLC27A2O14975 620 aa5.21□□□□□ -1.58
SMARCAD1-205ENST00000506089 NKRFO15226 690 aaKnown RBP eCLIP5.21□□□□□ -1.58
SMARCAD1-205ENST00000506089 DGKIO75912 1065 aa5.21□□□□□ -1.58
SMARCAD1-205ENST00000506089 DNAJC8O75937 253 aaPredicted RBP5.21□□□□□ -1.58
SMARCAD1-205ENST00000506089 MYL1P05976 194 aa5.21□□□□□ -1.58
SMARCAD1-205ENST00000506089 KCNC1P48547 511 aa5.21□□□□□ -1.58
SMARCAD1-205ENST00000506089 RBM10P98175 930 aaKnown RBP5.21□□□□□ -1.58
SMARCAD1-205ENST00000506089 MCL1Q07820 350 aa5.21□□□□□ -1.58
SMARCAD1-205ENST00000506089 ADAM9Q13443 819 aa5.21□□□□□ -1.58
SMARCAD1-205ENST00000506089 PCBP1Q15365 356 aaKnown RBP eCLIP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms