RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 AFAP1L2Q8N4X5 818 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 POU5F2Q8N7G0 328 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 KIAA1958Q8N8K9 716 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 USP7Q93009 1102 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 NOX5Q96PH1 765 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 SPTLC3Q9NUV7 552 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 HSPBP1Q9NZL4 362 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 TCAF2A6NFQ2 919 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 NEMP1O14524 444 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 FKBP9O95302 570 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 ADCYAP1R1P41586 468 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 AMPD3Q01432 767 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 DBPQ10586 325 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 PTPROQ16827 1216 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 CD276Q5ZPR3 534 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 CC2D1AQ6P1N0 951 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 LIPIQ6XZB0 460 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 FKBP9P1Q75LS8 142 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 GPATCH3Q96I76 525 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 PPP1R16BQ96T49 567 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 ELF4Q99607 663 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 GORASP1Q9BQQ3 440 aa5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 EPB41L4AQ9HCS5 686 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 CNOT6Q9ULM6 557 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-204ENST00000505804 RASSF10A6NK89 507 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 FOXP2O15409 715 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 EYA4O95677 639 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 PLA2G1BP04054 148 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 MMEP08473 750 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 ENO2P09104 434 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 BPIP17213 487 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 PI3P19957 117 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 PTX3P26022 381 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 KPNA1P52294 538 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 PFKPQ01813 784 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 ZNF124Q15973 351 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 CATSPEREQ5SY80 951 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 PHF19Q5T6S3 580 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 FAM129CQ86XR2 697 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 ERCC4Q92889 916 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 ZBTB8AQ96BR9 441 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 TTC1Q99614 292 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 C11orf84Q9BUA3 381 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 PCIF1Q9H4Z3 704 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 SLC39A2Q9NP94 309 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 CD320Q9NPF0 282 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 ACSS2Q9NR19 701 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 KCTD3Q9Y597 815 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 SPO11Q9Y5K1 396 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 COL4A3BPQ9Y5P4 624 aa5.68□□□□□ -1.5
TOPBP1-204ENST00000505804 TGM5O43548 720 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 SDHAP31040 664 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 THBS2P35442 1172 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 RAP1GAPP47736 663 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 LSSP48449 732 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 ITGA1P56199 1179 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 HERVK_113P62684 666 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 SMAD4Q13485 552 aaKnown RBP5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 VASNQ6EMK4 673 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 CNKSR3Q6P9H4 555 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 LHFPL2Q6ZUX7 228 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 DDX42Q86XP3 938 aaKnown RBP eCLIP5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 EFHBQ8N7U6 833 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 ATL2Q8NHH9 583 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 ASB15Q8WXK1 588 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 PWWP2AQ96N64 755 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 GBP4Q96PP9 640 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 IFT22Q9H7X7 185 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 PCDH12Q9NPG4 1184 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 TOMM22Q9NS69 142 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 UCKL1Q9NWZ5 548 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 ARHGAP28Q9P2N2 729 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 ATP8A1Q9Y2Q0 1164 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 PMF1-BGLAPU3KQ54 211 aa5.67□□□□□ -1.5
TOPBP1-204ENST00000505804 NPIPB6E9PJ23 425 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 ZEB2O60315 1214 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 TSPAN15O95858 294 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 CYP17A1P05093 508 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 CPEP16870 476 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 AOAHP28039 575 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 MC4RP32245 332 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 OCRLQ01968 901 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 ADAM9Q13443 819 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 STAT4Q14765 748 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 KCNA10Q16322 511 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 SKIDA1Q1XH10 827 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 ATP13A4Q4VNC1 1196 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 LINC00482Q8N8I6 264 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 KYQ8NBH2 561 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 HIPK4Q8NE63 616 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 BHLHE22Q8NFJ8 381 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 ZCRB1Q8TBF4 217 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 FNIP1Q8TF40 1166 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 ZSWIM3Q96MP5 696 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 PCDH18Q9HCL0 1135 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 EMC7Q9NPA0 242 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 BTBD7Q9P203 1132 aa5.66□□□□□ -1.5
TOPBP1-204ENST00000505804 PRAMEF22A3QJZ6 481 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 ZNF839A8K0R7 811 aa5.65□□□□□ -1.5
TOPBP1-204ENST00000505804 GOLGA6L22H0YM25 854 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms