RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 AMHP03971 560 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 EDNRBP24530 442 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 SBK1Q52WX2 424 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 BRDTQ58F21 947 aaPredicted RBP8.31□□□□□ -1.08
VCAN-206ENST00000505615 RASGRP2Q7LDG7 609 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 FAM160B2Q86V87 743 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 SMRP1Q8NCR6 262 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 DBF4BQ8NFT6 615 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 STAG1Q8WVM7 1258 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
VCAN-206ENST00000505615 C1QTNF2Q9BXJ5 285 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 LMAN2LQ9H0V9 348 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 C1orf115Q9H7X2 142 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 CLEC1BQ9P126 229 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 ARPP21Q9UBL0 812 aaPredicted RBP8.31□□□□□ -1.08
VCAN-206ENST00000505615 GTF2IRD1Q9UHL9 959 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 SLC4A4Q9Y6R1 1079 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 PLXNA4Q9HCM2 1894 aa8.31□□□□□ -1.08
VCAN-206ENST00000505615 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.3□□□□□ -1.08
VCAN-206ENST00000505615 NFIBO00712 420 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 MMP3P08254 477 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 RRP1P56182 461 aaKnown RBP8.3□□□□□ -1.08
VCAN-206ENST00000505615 CHMP4BP1P59074 171 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 PTK7Q13308 1070 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 ADAM15Q13444 863 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 BAATQ14032 418 aaPredicted RBP8.3□□□□□ -1.08
VCAN-206ENST00000505615 PLEKHG4Q58EX7 1191 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 C6orf118Q5T5N4 469 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 SLC30A10Q6XR72 485 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 ADSSL1Q8N142 457 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 STK11IPQ8N1F8 1099 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 SCFD2Q8WU76 684 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 AFG1LQ8WV93 481 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 TOP1MTQ969P6 601 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 GMCL1Q96IK5 515 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 YME1L1Q96TA2 773 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 OSBPL7Q9BZF2 842 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 HDAC6Q9UBN7 1215 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 ADD3Q9UEY8 706 aaKnown RBP8.3□□□□□ -1.08
VCAN-206ENST00000505615 DNMT3LQ9UJW3 386 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 CCPG1Q9ULG6 757 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 KAT6AQ92794 2004 aa8.3□□□□□ -1.08
VCAN-206ENST00000505615 ZMYND10O75800 440 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 GLP2RO95838 553 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 TTLL1O95922 423 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 MMP1P03956 469 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 ICAM3P32942 547 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 CTNNB1P35222 781 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 ZNF200P98182 395 aaPredicted RBP8.29□□□□□ -1.08
VCAN-206ENST00000505615 KRT76Q01546 638 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 ARHGAP1Q07960 439 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 COASYQ13057 564 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 CAMK1Q14012 370 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 ARID5BQ14865 1188 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 CCDC62Q6P9F0 684 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 FRMD5Q7Z6J6 570 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 TMEM57Q8N5G2 664 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 CHURC1Q8WUH1 139 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 CLUAP1Q96AJ1 413 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 RMDN1Q96DB5 314 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 DDRGK1Q96HY6 314 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 C11orf84Q9BUA3 381 aaPredicted RBP8.29□□□□□ -1.08
VCAN-206ENST00000505615 PUS7LQ9H0K6 701 aaKnown RBP8.29□□□□□ -1.08
VCAN-206ENST00000505615 IGFLR1Q9H665 355 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 RC3H2Q9HBD1 1191 aaKnown RBP8.29□□□□□ -1.08
VCAN-206ENST00000505615 MKNK2Q9HBH9 465 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 SLC24A3Q9HC58 644 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 IL1RAPL2Q9NP60 686 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 INCENPQ9NQS7 918 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 PAG1Q9NWQ8 432 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 PRR12Q9ULL5 1215 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 EXOC6BQ9Y2D4 811 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 USP15Q9Y4E8 981 aaPredicted RBP8.29□□□□□ -1.08
VCAN-206ENST00000505615 MYH6P13533 1939 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 EMSYQ7Z589 1322 aa8.29□□□□□ -1.08
VCAN-206ENST00000505615 GSG1L2A8MUP6 293 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 HAS3O00219 553 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 PRDM1O75626 825 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 ICAM1P05362 532 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 RB1P06400 928 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 TXNP10599 105 aaKnown RBP8.28□□□□□ -1.08
VCAN-206ENST00000505615 MCCP23508 829 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 BMPR1AP36894 532 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 NDUFV1P49821 464 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 SUZ12Q15022 739 aaKnown RBP8.28□□□□□ -1.08
VCAN-206ENST00000505615 UBE3CQ15386 1083 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 PTPN21Q16825 1174 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 KCTD1Q719H9 257 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 ADGRD2Q7Z7M1 963 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 BPHLQ86WA6 291 aaPredicted RBP8.28□□□□□ -1.08
VCAN-206ENST00000505615 TMEM105Q8N8V8 129 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 CLEC4DQ8WXI8 215 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 SUSD6Q92537 303 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 CLP1Q92989 425 aaKnown RBP8.28□□□□□ -1.08
VCAN-206ENST00000505615 NKD2Q969F2 451 aaPredicted RBP8.28□□□□□ -1.08
VCAN-206ENST00000505615 CHMP4CQ96CF2 233 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 RIPOR3Q96MK2 946 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 CNTNAP3BQ96NU0 1288 aa8.28□□□□□ -1.08
VCAN-206ENST00000505615 PHF7Q9BWX1 381 aaPredicted RBP8.28□□□□□ -1.08
VCAN-206ENST00000505615 CNTNAP3Q9BZ76 1288 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms