RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 POF1BQ8WVV4 589 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 GLG1Q92896 1179 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 TLE6Q9H808 572 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 RTEL1Q9NZ71 1219 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 PUF60Q9UHX1 559 aaKnown RBP11.41□□□□□ -0.58
NEDD9-210ENST00000505589 TUBE1Q9UJT0 475 aa11.41□□□□□ -0.58
NEDD9-210ENST00000505589 TCF7P36402 384 aaPredicted RBP11.4□□□□□ -0.58
NEDD9-210ENST00000505589 RRP1P56182 461 aaKnown RBP11.4□□□□□ -0.58
NEDD9-210ENST00000505589 MRPS9P82933 396 aaKnown RBP11.4□□□□□ -0.58
NEDD9-210ENST00000505589 BMS1Q14692 1282 aaKnown RBP11.4□□□□□ -0.58
NEDD9-210ENST00000505589 LPIN1Q14693 890 aa11.4□□□□□ -0.58
NEDD9-210ENST00000505589 CATIPQ7Z7H3 387 aa11.4□□□□□ -0.58
NEDD9-210ENST00000505589 ATOH1Q92858 354 aaPredicted RBP11.4□□□□□ -0.58
NEDD9-210ENST00000505589 GPRASP2Q96D09 838 aa11.4□□□□□ -0.58
NEDD9-210ENST00000505589 NEK1Q96PY6 1258 aa11.4□□□□□ -0.58
NEDD9-210ENST00000505589 PIGSQ96S52 555 aa11.4□□□□□ -0.58
NEDD9-210ENST00000505589 MAP3K14Q99558 947 aa11.4□□□□□ -0.58
NEDD9-210ENST00000505589 LZTS2Q9BRK4 669 aa11.4□□□□□ -0.58
NEDD9-210ENST00000505589 OSBPL3Q9H4L5 887 aa11.4□□□□□ -0.58
NEDD9-210ENST00000505589 AZI2Q9H6S1 392 aa11.4□□□□□ -0.58
NEDD9-210ENST00000505589 PCDHB7Q9Y5E2 793 aa11.4□□□□□ -0.58
NEDD9-210ENST00000505589 KAT6AQ92794 2004 aa11.4□□□□□ -0.59
NEDD9-210ENST00000505589 MYH6P13533 1939 aa11.39□□□□□ -0.59
NEDD9-210ENST00000505589 PIK3CDO00329 1044 aa11.39□□□□□ -0.59
NEDD9-210ENST00000505589 IFIT3O14879 490 aaKnown RBP11.39□□□□□ -0.59
NEDD9-210ENST00000505589 TBX10O75333 385 aa11.39□□□□□ -0.59
NEDD9-210ENST00000505589 AVPR2P30518 371 aa11.39□□□□□ -0.59
NEDD9-210ENST00000505589 KIF5BP33176 963 aa11.39□□□□□ -0.59
NEDD9-210ENST00000505589 MRPS6P82932 125 aaKnown RBP11.39□□□□□ -0.59
NEDD9-210ENST00000505589 MGAT3Q09327 533 aa11.39□□□□□ -0.59
NEDD9-210ENST00000505589 GRIK4Q16099 956 aa11.39□□□□□ -0.59
NEDD9-210ENST00000505589 SPOUT1Q5T280 376 aaKnown RBP11.39□□□□□ -0.59
NEDD9-210ENST00000505589 KLHL23Q8NBE8 558 aa11.39□□□□□ -0.59
NEDD9-210ENST00000505589 DNAJB3Q8WWF6 145 aa11.39□□□□□ -0.59
NEDD9-210ENST00000505589 RWDD1Q9H446 243 aaPredicted RBP11.39□□□□□ -0.59
NEDD9-210ENST00000505589 RC3H2Q9HBD1 1191 aaKnown RBP11.39□□□□□ -0.59
NEDD9-210ENST00000505589 SEC63Q9UGP8 760 aaKnown RBP11.39□□□□□ -0.59
NEDD9-210ENST00000505589 NR2E1Q9Y466 385 aa11.39□□□□□ -0.59
NEDD9-210ENST00000505589 CDY2AQ9Y6F7 541 aa11.39□□□□□ -0.59
NEDD9-210ENST00000505589 FRMPD4Q14CM0 1322 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 WDFY4Q6ZS81 3184 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 MBLAC1A4D2B0 266 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-210ENST00000505589 GFRA3O60609 400 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 PPP1R11O60927 126 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-210ENST00000505589 ITGB1P05556 798 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 LINC00271P0C7V0 271 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 HOXB8P17481 243 aaPredicted RBP11.38□□□□□ -0.59
NEDD9-210ENST00000505589 NRIP1P48552 1158 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 GNAQP50148 359 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 SLC26A2P50443 739 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 PAK2Q13177 524 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 CAMK1Q14012 370 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 GRM4Q14833 912 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 SEC23AQ15436 765 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 TMEM184AQ6ZMB5 413 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 RALYLQ86SE5 291 aaKnown RBP11.38□□□□□ -0.59
NEDD9-210ENST00000505589 ZBTB33Q86T24 672 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 TEX2Q8IWB9 1127 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 TMTC2Q8N394 836 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 PRSS33Q8NF86 280 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 IL31RAQ8NI17 732 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 GPKOWQ92917 476 aaPredicted RBP eCLIP11.38□□□□□ -0.59
NEDD9-210ENST00000505589 RRP36Q96EU6 259 aaKnown RBP11.38□□□□□ -0.59
NEDD9-210ENST00000505589 RPGRIP1Q96KN7 1286 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 TLR9Q9NR96 1032 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 C1orf112Q9NSG2 853 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 CLEC1BQ9P126 229 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 NLRC5Q86WI3 1866 aa11.38□□□□□ -0.59
NEDD9-210ENST00000505589 CARNS1A5YM72 827 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 SPDYE3A6NKU9 549 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 GPR182O15218 404 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 LINC01565O15544 149 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 SCG2P13521 617 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 CD52P31358 61 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 SP4Q02446 784 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 TCF15Q12870 199 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 WTAPQ15007 396 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 IER5LQ5T953 404 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 PLPPR4Q7Z2D5 763 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 RBM23Q86U06 439 aaKnown RBP11.37□□□□□ -0.59
NEDD9-210ENST00000505589 UBALD2Q8IYN6 164 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 ZNF710Q8N1W2 664 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 CTCFLQ8NI51 663 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-210ENST00000505589 RUFY2Q8WXA3 655 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 ZFP91Q96JP5 570 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-210ENST00000505589 NGRNQ9NPE2 291 aaKnown RBP11.37□□□□□ -0.59
NEDD9-210ENST00000505589 PADI3Q9ULW8 664 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 LZTS1Q9Y250 596 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 USP15Q9Y4E8 981 aaPredicted RBP11.37□□□□□ -0.59
NEDD9-210ENST00000505589 PCDHA2Q9Y5H9 948 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 TRPV2Q9Y5S1 764 aa11.37□□□□□ -0.59
NEDD9-210ENST00000505589 MRPL42Q9Y6G3 142 aaKnown RBP11.37□□□□□ -0.59
NEDD9-210ENST00000505589 TTC3P53804 2025 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 KDM3AQ9Y4C1 1321 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 SMIM35A0A1B0GVV1 85 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 INSRRP14616 1297 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 GTF2F1P35269 517 aaKnown RBP eCLIP11.36□□□□□ -0.59
NEDD9-210ENST00000505589 SARSP49591 514 aaKnown RBP11.36□□□□□ -0.59
NEDD9-210ENST00000505589 KRT17Q04695 432 aa11.36□□□□□ -0.59
NEDD9-210ENST00000505589 TROAPQ12815 778 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms