RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 KRT76Q01546 638 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 PDE4DQ08499 809 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 NCAPHQ15003 741 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 DEFB115Q30KQ5 88 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 GNPTABQ3T906 1256 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 ISM2Q6H9L7 571 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 SASS6Q6UVJ0 657 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 ABHD15Q6UXT9 468 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 MIER3Q7Z3K6 550 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 DHX40Q8IX18 779 aaKnown RBP11.63□□□□□ -0.55
TPM3-217ENST00000504663 TRIML1Q8N9V2 468 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 BANK1Q8NDB2 785 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 RDM1Q8NG50 284 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 FAM200AQ8TCP9 573 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 NEK9Q8TD19 979 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 SMARCE1Q969G3 411 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 CDHR1Q96JP9 859 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 GSDMAQ96QA5 445 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 PCYT2Q99447 389 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 ARHGAP39Q9C0H5 1083 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 ZMYND15Q9H091 742 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 ZFYVE28Q9HCC9 887 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 PDGFCQ9NRA1 345 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 ANO10Q9NW15 660 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 FLRT1Q9NZU1 646 aa11.63□□□□□ -0.55
TPM3-217ENST00000504663 DDX41Q9UJV9 622 aaKnown RBP11.63□□□□□ -0.55
TPM3-217ENST00000504663 MYH9P35579 1960 aaKnown RBP11.62□□□□□ -0.55
TPM3-217ENST00000504663 WDR64B1ANS9 1081 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 PPP1R3GB7ZBB8 358 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 ZNF862O60290 1169 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 RHOBTB3O94955 611 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 EYA4O95677 639 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 RPN1P04843 607 aaKnown RBP11.62□□□□□ -0.55
TPM3-217ENST00000504663 XRCC6P12956 609 aaKnown RBP eCLIP11.62□□□□□ -0.55
TPM3-217ENST00000504663 SFNP31947 248 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 JAK3P52333 1124 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 ACTR2P61160 394 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 MAP2K5Q13163 448 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 KCNB1Q14721 858 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 KMT5BQ4FZB7 885 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 SEPT14Q6ZU15 432 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 EEPD1Q7L9B9 569 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 CCDC60Q8IWA6 550 aaPredicted RBP11.62□□□□□ -0.55
TPM3-217ENST00000504663 SMYD4Q8IYR2 804 aaPredicted RBP11.62□□□□□ -0.55
TPM3-217ENST00000504663 KCTD17Q8N5Z5 321 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 SYT2Q8N9I0 419 aaPredicted RBP11.62□□□□□ -0.55
TPM3-217ENST00000504663 RNF214Q8ND24 703 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 ERMNQ8TAM6 284 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 BPIFA3Q9BQP9 254 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 RUSC1Q9BVN2 902 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 JPH1Q9HDC5 661 aaPredicted RBP11.62□□□□□ -0.55
TPM3-217ENST00000504663 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.62□□□□□ -0.55
TPM3-217ENST00000504663 SIP14410 1827 aa11.62□□□□□ -0.55
TPM3-217ENST00000504663 NPHP3-ACAD11A0A0J9YXS1 232 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 GSTTP1A0A1W2PQM5 241 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 ASB14A6NK59 587 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 P4HBP07237 508 aaKnown RBP11.61□□□□□ -0.55
TPM3-217ENST00000504663 SUPT20HL2P0C7V6 817 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 ATP4AP20648 1035 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 VEGFBP49765 207 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 ARHGAP1Q07960 439 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 GRM1Q13255 1194 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 LY6KQ17RY6 165 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 UNC13DQ70J99 1090 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 SV2BQ7L1I2 683 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 LUZP1Q86V48 1076 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 KIAA0895Q8NCT3 520 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 RASSF8Q8NHQ8 419 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 PIGOQ8TEQ8 1089 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 DDX12PQ92771 950 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 COPS5Q92905 334 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 CDK5RAP3Q96JB5 506 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 FGFBP2Q9BYJ0 223 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 VTA1Q9NP79 307 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 SLC9A2Q9UBY0 812 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 GDAQ9Y2T3 454 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 PCDHA2Q9Y5H9 948 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 IVNS1ABPQ9Y6Y0 642 aa11.61□□□□□ -0.55
TPM3-217ENST00000504663 MYH11P35749 1972 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.6□□□□□ -0.55
TPM3-217ENST00000504663 TMEM150BA6NC51 233 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 SORBS3O60504 671 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 SMC2O95347 1197 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 GGPS1O95749 300 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 TGFB3P10600 412 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 ZNF165P49910 485 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 MAPK7Q13164 816 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 GIT2Q14161 759 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 DHX8Q14562 1220 aaKnown RBP11.6□□□□□ -0.55
TPM3-217ENST00000504663 CCL14Q16627 93 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 COBLL1Q53SF7 1204 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 GJC2Q5T442 439 aaPredicted RBP11.6□□□□□ -0.55
TPM3-217ENST00000504663 RINT1Q6NUQ1 792 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 METTL7BQ6UX53 244 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 C1orf186Q6ZWK4 172 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 CYFIP1Q7L576 1253 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 GPBP1Q86WP2 473 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 C4orf19Q8IY42 314 aa11.6□□□□□ -0.55
TPM3-217ENST00000504663 SMAP1Q8IYB5 467 aaPredicted RBP11.6□□□□□ -0.55
TPM3-217ENST00000504663 DAW1Q8N136 415 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms