RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 GJA10Q969M2 543 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 FAM49AQ9H0Q0 323 aaPredicted RBP16.18■□□□□ 0.18
HOXC9-202ENST00000504557 ZNF576Q9H609 170 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
HOXC9-202ENST00000504557 YBX2Q9Y2T7 364 aaKnown RBP16.18■□□□□ 0.18
HOXC9-202ENST00000504557 SAMM50Q9Y512 469 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 EMSYQ7Z589 1322 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 NRCAMQ92823 1304 aa16.18■□□□□ 0.18
HOXC9-202ENST00000504557 CTDNEP1O95476 244 aa16.17■□□□□ 0.18
HOXC9-202ENST00000504557 SETQ01105 290 aaPredicted RBP16.17■□□□□ 0.18
HOXC9-202ENST00000504557 RBL2Q08999 1139 aa16.17■□□□□ 0.18
HOXC9-202ENST00000504557 MBTPS1Q14703 1052 aa16.17■□□□□ 0.18
HOXC9-202ENST00000504557 GRIN2CQ14957 1233 aa16.17■□□□□ 0.18
HOXC9-202ENST00000504557 RAB30Q15771 203 aa16.17■□□□□ 0.18
HOXC9-202ENST00000504557 FAM117BQ6P1L5 589 aa16.17■□□□□ 0.18
HOXC9-202ENST00000504557 CNKSR3Q6P9H4 555 aa16.17■□□□□ 0.18
HOXC9-202ENST00000504557 TRAF7Q6Q0C0 670 aa16.17■□□□□ 0.18
HOXC9-202ENST00000504557 CKAP2LQ8IYA6 745 aa16.17■□□□□ 0.18
HOXC9-202ENST00000504557 CRYGNQ8WXF5 182 aa16.17■□□□□ 0.18
HOXC9-202ENST00000504557 TUBE1Q9UJT0 475 aa16.17■□□□□ 0.18
HOXC9-202ENST00000504557 CHMP2AO43633 222 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 LGR5O75473 907 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 INSRRP14616 1297 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 XBP1P17861 261 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 HOXC8P31273 242 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 PLCB4Q15147 1175 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 INF2Q27J81 1249 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 SWSAP1Q6NVH7 229 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 MIS18BP1Q6P0N0 1132 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 GTF3C6Q969F1 213 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 OSBPL7Q9BZF2 842 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 SLC28A3Q9HAS3 691 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 STXBP5LQ9Y2K9 1186 aa16.16■□□□□ 0.18
HOXC9-202ENST00000504557 CCDC194A0A1B0GVG4 234 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 POTEB3A0JP26 581 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 DHX15O43143 795 aaKnown RBP16.15■□□□□ 0.18
HOXC9-202ENST00000504557 JAK2O60674 1132 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 PARNO95453 639 aaKnown RBP16.15■□□□□ 0.18
HOXC9-202ENST00000504557 TDP2O95551 362 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 FOSL2P15408 326 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 WDR5P61964 334 aaKnown RBP16.15■□□□□ 0.18
HOXC9-202ENST00000504557 DEFB103AP81534 67 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 TMEM62Q0P6H9 643 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 NONOQ15233 471 aaKnown RBP eCLIP16.15■□□□□ 0.184e-7■■■■■ 30
HOXC9-202ENST00000504557 FAM160B1Q5W0V3 765 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 PPP2R2DQ66LE6 453 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 PDXDC2PQ6P474 469 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 POTEBQ6S5H4 581 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 CCDC60Q8IWA6 550 aaPredicted RBP16.15■□□□□ 0.18
HOXC9-202ENST00000504557 DNAJB3Q8WWF6 145 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 SLC9A7Q96T83 725 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 ZBED2Q9BTP6 218 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 PRDM12Q9H4Q4 367 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 CERS4Q9HA82 394 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 ZNF302Q9NR11 478 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 STK36Q9NRP7 1315 aa16.15■□□□□ 0.18
HOXC9-202ENST00000504557 MSH4O15457 936 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 EDIL3O43854 480 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 BAIAP3O94812 1187 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 CXCL10P02778 98 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 CA3P07451 260 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 CIITAP33076 1130 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 ADAM17P78536 824 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 IKBKEQ14164 716 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 NPY5RQ15761 445 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 LETM2Q2VYF4 491 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 ABHD15Q6UXT9 468 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 HERC6Q8IVU3 1022 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 DAGLBQ8NCG7 672 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 DBF4BQ8NFT6 615 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 OXER1Q8TDS5 423 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 WASF1Q92558 559 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 LENG9Q96B70 501 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 PHF20Q9BVI0 1012 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 TBC1D22BQ9NU19 505 aa16.14■□□□□ 0.17
HOXC9-202ENST00000504557 TMEM265A0A087WTH1 108 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 GAS7O60861 476 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 ATG7O95352 703 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 GHRP10912 638 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 USP11P51784 963 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 MARCH8Q5T0T0 291 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 LRCH2Q5VUJ6 765 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 GALNT17Q6IS24 598 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 PIK3AP1Q6ZUJ8 805 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 PLPPR4Q7Z2D5 763 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 KRT25Q7Z3Z0 450 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 RSPH3Q86UC2 560 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 CCDC83Q8IWF9 413 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 PIAS4Q8N2W9 510 aaPredicted RBP16.13■□□□□ 0.17
HOXC9-202ENST00000504557 PPM1EQ8WY54 764 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 IL17RAQ96F46 866 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 C22orf23Q9BZE7 217 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 GABBR1Q9UBS5 961 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 PCDHA11Q9Y5I1 949 aa16.13■□□□□ 0.17
HOXC9-202ENST00000504557 COL6A3P12111 3177 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 RRN3P2A6NIE6 340 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 KIF28PB7ZC32 967 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 M0R2N6 131 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 TLL1O43897 1013 aa16.12■□□□□ 0.17
HOXC9-202ENST00000504557 CHRNA1P02708 482 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms