RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PPP2R5CQ13362 524 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 NBR1Q14596 966 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 SNX17Q15036 470 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 C1orf53Q5VUE5 145 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 MIS18BP1Q6P0N0 1132 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 ABHD15Q6UXT9 468 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 SLC43A3Q8NBI5 491 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 RDM1Q8NG50 284 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 GJA10Q969M2 543 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 VTI1AQ96AJ9 217 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 KATNAL1Q9BW62 490 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 UNC45AQ9H3U1 944 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 SMARCAD1Q9H4L7 1026 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 VAV3Q9UKW4 847 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 PCDHA12Q9UN75 941 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 PCDHA10Q9Y5I2 948 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 MYH11P35749 1972 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 GRIN2DO15399 1336 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 A0A0U1RQG5 324 aaPredicted RBP13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 WDR64B1ANS9 1081 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 H3BRB1 525 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 ARVCFO00192 962 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 LAD1O00515 517 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 PSAPP07602 524 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 OR52Z1P0C646 297 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 SUPT20HL2P0C7V6 817 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 ZNF286BP0CG31 522 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 PSEN2P49810 448 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 CDK7P50613 346 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 JAK3P52333 1124 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 PTGDRQ13258 359 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 ITGA7Q13683 1181 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 PCYT2Q99447 389 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 HTATIP2Q9BUP3 242 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 TUT1Q9H6E5 874 aaKnown RBP13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 TTC12Q9H892 705 aaPredicted RBP13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 DISC1Q9NRI5 854 aa13.42□□□□□ -0.26
PDLIM5-208ENST00000504489 BRD1O95696 1058 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 BMP15O95972 392 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 F13A1P00488 732 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 PRPHP41219 470 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 TXKP42681 527 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 STAT5BP51692 787 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 PSMC6P62333 389 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 PTPN11Q06124 597 aaPredicted RBP13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 SPIRE1Q08AE8 756 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 PKP1Q13835 747 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 MFSD10Q14728 455 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 LRRC26Q2I0M4 334 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 NBPF20Q3BBV1 942 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 UTP14CQ5TAP6 766 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 NFRKBQ6P4R8 1299 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 PLPPR4Q7Z2D5 763 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 MIER3Q7Z3K6 550 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 SESTD1Q86VW0 696 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 AFAP1L1Q8TED9 768 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 ERAP1Q9NZ08 941 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 DAXXQ9UER7 740 aaPredicted RBP13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 ZNF215Q9UL58 517 aaPredicted RBP13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 RBM19Q9Y4C8 960 aaKnown RBP13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 SAMM50Q9Y512 469 aa13.41□□□□□ -0.26
PDLIM5-208ENST00000504489 MROH7Q68CQ1 1323 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 TNRC18O15417 2968 aaPredicted RBP13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 CHMP2AO43633 222 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 DDIT3P35638 169 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 SLC26A2P50443 739 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 ATP2C1P98194 919 aaPredicted RBP13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 KIAA0753Q2KHM9 967 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 FAM160B1Q5W0V3 765 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 SWSAP1Q6NVH7 229 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 FAM173BQ6P4H8 233 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 ANKRD33Q7Z3H0 272 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 TRIM50Q86XT4 487 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 CCDC60Q8IWA6 550 aaPredicted RBP13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 GLG1Q92896 1179 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 AZI2Q9H6S1 392 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 ZNF302Q9NR11 478 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 ZDHHC9Q9Y397 364 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 MAFBQ9Y5Q3 323 aaPredicted RBP13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 LTBP2Q14767 1821 aa13.4□□□□□ -0.26
PDLIM5-208ENST00000504489 CEP290O15078 2479 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 SCN5AQ14524 2016 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 EML1O00423 815 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 BACH1O14867 736 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 RTP1P59025 263 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 EPHA7Q15375 998 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 SF3A1Q15459 793 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 ARL6IP4Q66PJ3 421 aaKnown RBP13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 PDXDC2PQ6P474 469 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 TOX2Q96NM4 488 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 RNPEPQ9H4A4 650 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 CEP131Q9UPN4 1083 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 TANC1Q9C0D5 1861 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 IGSF9BQ9UPX0 1349 aa13.39□□□□□ -0.27
PDLIM5-208ENST00000504489 P4HBP07237 508 aaKnown RBP13.38□□□□□ -0.27
PDLIM5-208ENST00000504489 HOXC8P31273 242 aa13.38□□□□□ -0.27
PDLIM5-208ENST00000504489 TECP42680 631 aa13.38□□□□□ -0.27
PDLIM5-208ENST00000504489 NUCB2P80303 420 aa13.38□□□□□ -0.27
PDLIM5-208ENST00000504489 PDIA5Q14554 519 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms