RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 SGSM2O43147 1006 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 ULK1O75385 1050 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 KRT1P04264 644 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 PRR5P85299 388 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 TARBP2Q15633 366 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 DDB1Q16531 1140 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 EMC4Q5J8M3 183 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 HABP4Q5JVS0 413 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 OTOP1Q7RTM1 612 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 LDHDQ86WU2 507 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 PHOSPHO1Q8TCT1 267 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 SH3RF2Q8TEC5 729 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 TSPAN17Q96FV3 270 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 SGPP1Q9BX95 441 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 IRF2BPLQ9H1B7 796 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 GCM1Q9NP62 436 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 KLHL42Q9P2K6 505 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 PRAMEF25A6NGN4 478 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 DBX1A6NMT0 343 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 TADA3O75528 432 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 PFKLP17858 780 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 FSTL4Q6MZW2 842 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 CYP4F22Q6NT55 531 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 EFHBQ8N7U6 833 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 CNTD1Q8N815 330 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 MZB1Q8WU39 189 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 JDP2Q8WYK2 163 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 SCYL1Q96KG9 808 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 PUS7LQ9H0K6 701 aaKnown RBP6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 CCDC8Q9H0W5 538 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 CD320Q9NPF0 282 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 ASH2LQ9UBL3 628 aa6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 SMG5Q9UPR3 1016 aaKnown RBP6.69□□□□□ -1.34
TRAPPC13-205ENST00000504243 CLASP2O75122 1294 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 ZBTB48P10074 688 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 PTPN1P18031 435 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 CDR1P51861 262 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 ZNF200P98182 395 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 MTMR1Q13613 665 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 KCNA10Q16322 511 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 BROXQ5VW32 411 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 NOSTRINQ8IVI9 506 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 CLEC4DQ8WXI8 215 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 ERCC4Q92889 916 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 SLC5A5Q92911 643 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 DDX11Q96FC9 970 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 SIGLEC10Q96LC7 697 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 TOX2Q96NM4 488 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 ELF4Q99607 663 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 RNF38Q9H0F5 515 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 BCAS3Q9H6U6 928 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 ZNF652Q9Y2D9 606 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 NOC2LQ9Y3T9 749 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 PCDHA5Q9Y5H7 936 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 SPO11Q9Y5K1 396 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 IRS2Q9Y4H2 1338 aa6.68□□□□□ -1.34
TRAPPC13-205ENST00000504243 TCRBV5S2A0A599 114 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 MARCH6O60337 910 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 BUB1BO60566 1050 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 PRKD3O94806 890 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 NCAM1P13591 858 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 LSP1P33241 339 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 GJA4P35212 333 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 ARRDC4Q8NCT1 418 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 ALG3Q92685 438 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 AHCYL2Q96HN2 611 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 ACSS2Q9NR19 701 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 KCNH7Q9NS40 1196 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 CNOT6Q9ULM6 557 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 HCFC2Q9Y5Z7 792 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 IRAK3Q9Y616 596 aa6.67□□□□□ -1.34
TRAPPC13-205ENST00000504243 FAM90A27PA6NNH2 459 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 NPIPB6E9PJ23 425 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 RFXAPO00287 272 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 ALDH1L1O75891 902 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 EPHB3P54753 998 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 SESN3P58005 492 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 FAPQ12884 760 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 ZNF385BQ569K4 471 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 TCEAL9Q9UHQ7 104 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 TRHDEQ9UKU6 1024 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 TELO2Q9Y4R8 837 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 B3GALT1Q9Y5Z6 326 aa6.66□□□□□ -1.34
TRAPPC13-205ENST00000504243 DVL2O14641 736 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 FOXP2O15409 715 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 TGM5O43548 720 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 CYP17A1P05093 508 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 PTX3P26022 381 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 EPHA5P54756 1037 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 LINC00310P59036 64 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 SEC23AQ15436 765 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 PAN2Q504Q3 1202 aaKnown RBP6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 CREB3L3Q68CJ9 461 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 CC2D1AQ6P1N0 951 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 IGDCC3Q8IVU1 814 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 CLRN3Q8NCR9 226 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 HIPK4Q8NE63 616 aa6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 ZSCAN18Q8TBC5 510 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC13-205ENST00000504243 KRTAP4-12Q9BQ66 201 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms