RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 PDGFDQ9GZP0 370 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P17-201ENST00000504195 RPS6KA4O75676 772 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 CPP00450 1065 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 HOXB6P17509 224 aaKnown RBP3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 HOXC12P31275 282 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 PTGS2P35354 604 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 MSX2P35548 267 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 DUSP8Q13202 625 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 RNF151Q2KHN1 245 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 STPG3Q8N7X2 389 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 KLHL6Q8WZ60 621 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 CCDC140Q96MF4 163 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 NRDE2Q9H7Z3 1164 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 SLC6A20Q9NP91 592 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 PUF60Q9UHX1 559 aaKnown RBP3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 PACSIN3Q9UKS6 424 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 PPT2Q9UMR5 302 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 NR2E1Q9Y466 385 aa3.59□□□□□ -1.83
HMGB3P17-201ENST00000504195 A0A1W2PQH9 124 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 CAPN14A8MX76 684 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 POU3F3P20264 500 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 LTBRP36941 435 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 GLRBP48167 497 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 FOXL1Q12952 345 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 MAPK7Q13164 816 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 MBNL2Q5VZF2 373 aaKnown RBP3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 RCBTB1Q8NDN9 531 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 SPATA32Q96LK8 384 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 METTL5Q9NRN9 209 aaKnown RBP3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 CLDND1Q9NY35 253 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 PLA2G3Q9NZ20 509 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 RBPJLQ9UBG7 517 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 PCDHB10Q9UN67 800 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 PTPN22Q9Y2R2 807 aa3.58□□□□□ -1.84
HMGB3P17-201ENST00000504195 ARHGAP6O43182 974 aa3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 SCG5P05408 212 aa3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 FAHP16930 419 aa3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 EIF6P56537 245 aaKnown RBP3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 TOP3AQ13472 1001 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 GRM7Q14831 915 aa3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 PAN2Q504Q3 1202 aaKnown RBP3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 ZNF394Q53GI3 561 aa3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 PHF19Q5T6S3 580 aa3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 KIAA1211LQ6NV74 962 aa3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 ZNF662Q6ZS27 426 aa3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 GRASPQ7Z6J2 395 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 CCDC103Q8IW40 242 aa3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 MRGPRX3Q96LB0 322 aa3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 APEX2Q9UBZ4 518 aa3.57□□□□□ -1.84
HMGB3P17-201ENST00000504195 PMS2P1A4D2B8 440 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 ETV4P43268 484 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 FANCCQ00597 558 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 PFKPQ01813 784 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 CD276Q5ZPR3 534 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 VHLLQ6RSH7 139 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 RD3Q7Z3Z2 195 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 MPHOSPH9Q99550 1183 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 BACH2Q9BYV9 841 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 FBXO10Q9UK96 956 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 PCDHGB7Q9Y5F8 929 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 PCDHA2Q9Y5H9 948 aa3.56□□□□□ -1.84
HMGB3P17-201ENST00000504195 ZNF839A8K0R7 811 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 MATN2O00339 956 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 ITGAVP06756 1048 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 ZNF16P17020 682 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 GJA4P35212 333 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 GIPRP48546 466 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 RRADP55042 308 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 LDLRAD1Q5T700 205 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 USP30Q70CQ3 517 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 HDGFL2Q7Z4V5 671 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 D2HGDHQ8N465 521 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 CLEC4DQ8WXI8 215 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 HAS1Q92839 578 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 FBXL7Q9UJT9 491 aa3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 DDX41Q9UJV9 622 aaKnown RBP3.55□□□□□ -1.84
HMGB3P17-201ENST00000504195 SLC27A2O14975 620 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 PPFIA4O75335 1185 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 IL18BPO95998 194 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 SNRPB2P08579 225 aaKnown RBP3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 CASP7P55210 303 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 GRIN1Q05586 938 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 CYP4F3Q08477 520 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 RRP1BQ14684 758 aaKnown RBP3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 CCDC81Q6ZN84 652 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 CXXC5Q7LFL8 322 aaKnown RBP3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 PPIL6Q8IXY8 311 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 ZNF654Q8IZM8 581 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 ANKRD35Q8N283 1001 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 SMG7Q92540 1137 aaKnown RBP3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 PPP1R14AQ96A00 147 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 TACO1Q9BSH4 297 aaKnown RBP3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 GPRC5BQ9NZH0 403 aa3.54□□□□□ -1.84
HMGB3P17-201ENST00000504195 SPATA31A6Q5VVP1 1343 aa3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 ESYT3A0FGR9 886 aa3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 ARNTLO00327 626 aa3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 ECI1P42126 302 aa3.53□□□□□ -1.84
HMGB3P17-201ENST00000504195 SOX9P48436 509 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms