RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 FAM47CQ5HY64 1035 aa20.47■□□□□ 0.87
DDR1-252ENST00000504152 NCAPH2Q6IBW4 605 aa20.47■□□□□ 0.87
DDR1-252ENST00000504152 PDXDC2PQ6P474 469 aa20.47■□□□□ 0.87
DDR1-252ENST00000504152 DTHD1Q6ZMT9 781 aa20.47■□□□□ 0.87
DDR1-252ENST00000504152 SLC43A3Q8NBI5 491 aa20.47■□□□□ 0.87
DDR1-252ENST00000504152 AFAP1L1Q8TED9 768 aa20.47■□□□□ 0.87
DDR1-252ENST00000504152 DPF3Q92784 378 aa20.47■□□□□ 0.87
DDR1-252ENST00000504152 PCYT2Q99447 389 aa20.47■□□□□ 0.87
DDR1-252ENST00000504152 GABBR1Q9UBS5 961 aa20.47■□□□□ 0.87
DDR1-252ENST00000504152 DCDC2CA8MYV0 355 aa20.46■□□□□ 0.87
DDR1-252ENST00000504152 EML1O00423 815 aa20.46■□□□□ 0.87
DDR1-252ENST00000504152 BRD1O95696 1058 aa20.46■□□□□ 0.87
DDR1-252ENST00000504152 RTP1P59025 263 aa20.46■□□□□ 0.87
DDR1-252ENST00000504152 NUCB2P80303 420 aa20.46■□□□□ 0.87
DDR1-252ENST00000504152 ATP2C1P98194 919 aaPredicted RBP20.46■□□□□ 0.87
DDR1-252ENST00000504152 PDIA5Q14554 519 aa20.46■□□□□ 0.87
DDR1-252ENST00000504152 TRIM50Q86XT4 487 aa20.46■□□□□ 0.87
DDR1-252ENST00000504152 CCDC60Q8IWA6 550 aaPredicted RBP20.46■□□□□ 0.87
DDR1-252ENST00000504152 CKAP2LQ8IYA6 745 aa20.46■□□□□ 0.87
DDR1-252ENST00000504152 RAB34Q9BZG1 259 aa20.46■□□□□ 0.87
DDR1-252ENST00000504152 RNPEPQ9H4A4 650 aa20.46■□□□□ 0.87
DDR1-252ENST00000504152 ATP11BQ9Y2G3 1177 aa20.46■□□□□ 0.87
DDR1-252ENST00000504152 MAFBQ9Y5Q3 323 aaPredicted RBP20.46■□□□□ 0.87
DDR1-252ENST00000504152 SCN10AQ9Y5Y9 1956 aa20.45■□□□□ 0.86
DDR1-252ENST00000504152 TLR3O15455 904 aaKnown RBP20.45■□□□□ 0.86
DDR1-252ENST00000504152 DKC1O60832 514 aaKnown RBP eCLIP20.45■□□□□ 0.86
DDR1-252ENST00000504152 MARK3P27448 753 aa20.45■□□□□ 0.86
DDR1-252ENST00000504152 SPIRE1Q08AE8 756 aa20.45■□□□□ 0.86
DDR1-252ENST00000504152 ARL6IP4Q66PJ3 421 aaKnown RBP20.45■□□□□ 0.86
DDR1-252ENST00000504152 ANKRD33Q7Z3H0 272 aa20.45■□□□□ 0.86
DDR1-252ENST00000504152 SESTD1Q86VW0 696 aa20.45■□□□□ 0.86
DDR1-252ENST00000504152 TOX2Q96NM4 488 aa20.45■□□□□ 0.86
DDR1-252ENST00000504152 HDAC6Q9UBN7 1215 aa20.45■□□□□ 0.86
DDR1-252ENST00000504152 CLIC4Q9Y696 253 aa20.45■□□□□ 0.86
DDR1-252ENST00000504152 MYH9P35579 1960 aaKnown RBP20.45■□□□□ 0.86
DDR1-252ENST00000504152 MKI67P46013 3256 aaKnown RBP20.44■□□□□ 0.86
DDR1-252ENST00000504152 EVI5O60447 810 aa20.44■□□□□ 0.86
DDR1-252ENST00000504152 P4HBP07237 508 aaKnown RBP20.44■□□□□ 0.86
DDR1-252ENST00000504152 GNAT1P11488 350 aa20.44■□□□□ 0.86
DDR1-252ENST00000504152 FXR2P51116 673 aaKnown RBP eCLIP20.44■□□□□ 0.86
DDR1-252ENST00000504152 CEBPZQ03701 1054 aaKnown RBP20.44■□□□□ 0.86
DDR1-252ENST00000504152 TLE2Q04725 743 aa20.44■□□□□ 0.86
DDR1-252ENST00000504152 TRIM60Q495X7 471 aa20.44■□□□□ 0.86
DDR1-252ENST00000504152 ATL3Q6DD88 541 aa20.44■□□□□ 0.86
DDR1-252ENST00000504152 ATP6V0A1Q93050 837 aa20.44■□□□□ 0.86
DDR1-252ENST00000504152 NRBP2Q9NSY0 501 aa20.44■□□□□ 0.86
DDR1-252ENST00000504152 TFIP11Q9UBB9 837 aaKnown RBP20.44■□□□□ 0.86
DDR1-252ENST00000504152 ZDHHC9Q9Y397 364 aa20.44■□□□□ 0.86
DDR1-252ENST00000504152 ATP6V1DQ9Y5K8 247 aa20.44■□□□□ 0.86
DDR1-252ENST00000504152 STK24Q9Y6E0 443 aa20.44■□□□□ 0.86
DDR1-252ENST00000504152 POTEB3A0JP26 581 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 PQBP1O60828 265 aaKnown RBP20.43■□□□□ 0.86
DDR1-252ENST00000504152 SMIM10L2AP0DMW4 78 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 SMIM10L2BP0DMW5 78 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 QARSP47897 775 aaKnown RBP20.43■□□□□ 0.86
DDR1-252ENST00000504152 PSMC5P62195 406 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 POTEBQ6S5H4 581 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 ERMNQ8TAM6 284 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 PPP1R13LQ8WUF5 828 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 LRWD1Q9UFC0 647 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 GTF2IRD1Q9UHL9 959 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 CFAP45Q9UL16 551 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 TRPC6Q9Y210 931 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 KAT6AQ92794 2004 aa20.43■□□□□ 0.86
DDR1-252ENST00000504152 HBP1O60381 514 aa20.42■□□□□ 0.86
DDR1-252ENST00000504152 PLCB4Q15147 1175 aa20.42■□□□□ 0.86
DDR1-252ENST00000504152 FOXD4L6Q3SYB3 417 aaPredicted RBP20.42■□□□□ 0.86
DDR1-252ENST00000504152 FOXD4L3Q6VB84 417 aaPredicted RBP20.42■□□□□ 0.86
DDR1-252ENST00000504152 BANK1Q8NDB2 785 aa20.42■□□□□ 0.86
DDR1-252ENST00000504152 NEK9Q8TD19 979 aa20.42■□□□□ 0.86
DDR1-252ENST00000504152 BBXQ8WY36 941 aaPredicted RBP20.42■□□□□ 0.86
DDR1-252ENST00000504152 FAM167AQ96KS9 214 aa20.42■□□□□ 0.86
DDR1-252ENST00000504152 USP28Q96RU2 1077 aa20.42■□□□□ 0.86
DDR1-252ENST00000504152 EIF2AK1Q9BQI3 630 aaKnown RBP20.42■□□□□ 0.86
DDR1-252ENST00000504152 NRCAMQ92823 1304 aa20.42■□□□□ 0.86
DDR1-252ENST00000504152 C17orf102A2RUQ5 167 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 POTEMA6NI47 508 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 RRN3P2A6NIE6 340 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 SLITRK3O94933 977 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 ATP4AP20648 1035 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 DDIT3P35638 169 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 TRMT1LQ7Z2T5 733 aaKnown RBP20.41■□□□□ 0.86
DDR1-252ENST00000504152 TPH2Q8IWU9 490 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 FAM126BQ8IXS8 530 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 IGSF22Q8N9C0 903 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 ATP8B4Q8TF62 1192 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 DYDC2Q96IM9 177 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 HSD17B14Q9BPX1 270 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 TRPV6Q9H1D0 765 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 ZSWIM4Q9H7M6 989 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 SETD4Q9NVD3 440 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 NOD1Q9Y239 953 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 NR2E3Q9Y5X4 410 aa20.41■□□□□ 0.86
DDR1-252ENST00000504152 VWA3AA6NCI4 1184 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 B4GALT4O60513 344 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 CD4P01730 458 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 INSRRP14616 1297 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 FAAP100Q0VG06 881 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 PPFIA1Q13136 1202 aa20.4■□□□□ 0.86
DDR1-252ENST00000504152 SLC39A14Q15043 492 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms