RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 C4orf32Q8N8J7 132 aa18.59■□□□□ 0.57
SCLT1-205ENST00000503401 PRDM5Q9NQX1 630 aaPredicted RBP18.59■□□□□ 0.57
SCLT1-205ENST00000503401 ZNF302Q9NR11 478 aa18.59■□□□□ 0.57
SCLT1-205ENST00000503401 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.59■□□□□ 0.57
SCLT1-205ENST00000503401 ERAP1Q9NZ08 941 aa18.59■□□□□ 0.57
SCLT1-205ENST00000503401 GABBR1Q9UBS5 961 aa18.59■□□□□ 0.57
SCLT1-205ENST00000503401 PCDHA12Q9UN75 941 aa18.59■□□□□ 0.57
SCLT1-205ENST00000503401 RANBP2P49792 3224 aaKnown RBP18.58■□□□□ 0.57
SCLT1-205ENST00000503401 MYH15Q9Y2K3 1946 aa18.58■□□□□ 0.57
SCLT1-205ENST00000503401 MROH7Q68CQ1 1323 aa18.58■□□□□ 0.57
SCLT1-205ENST00000503401 SMIM10L2AP0DMW4 78 aa18.58■□□□□ 0.56
SCLT1-205ENST00000503401 SMIM10L2BP0DMW5 78 aa18.58■□□□□ 0.56
SCLT1-205ENST00000503401 SYN1P17600 705 aa18.58■□□□□ 0.56
SCLT1-205ENST00000503401 ZNF200P98182 395 aaPredicted RBP18.58■□□□□ 0.56
SCLT1-205ENST00000503401 SPIRE1Q08AE8 756 aa18.58■□□□□ 0.56
SCLT1-205ENST00000503401 FAAP100Q0VG06 881 aa18.58■□□□□ 0.56
SCLT1-205ENST00000503401 PPP2R5CQ13362 524 aa18.58■□□□□ 0.56
SCLT1-205ENST00000503401 UGCGQ16739 394 aa18.58■□□□□ 0.56
SCLT1-205ENST00000503401 ZMYND8Q9ULU4 1186 aaPredicted RBP18.58■□□□□ 0.56
SCLT1-205ENST00000503401 DCDC2CA8MYV0 355 aa18.57■□□□□ 0.56
SCLT1-205ENST00000503401 SFNP31947 248 aa18.57■□□□□ 0.56
SCLT1-205ENST00000503401 JAK3P52333 1124 aa18.57■□□□□ 0.56
SCLT1-205ENST00000503401 ORC2Q13416 577 aaPredicted RBP18.57■□□□□ 0.56
SCLT1-205ENST00000503401 FAM160B1Q5W0V3 765 aa18.57■□□□□ 0.56
SCLT1-205ENST00000503401 PDXDC2PQ6P474 469 aa18.57■□□□□ 0.56
SCLT1-205ENST00000503401 PLPPR4Q7Z2D5 763 aa18.57■□□□□ 0.56
SCLT1-205ENST00000503401 TOX2Q96NM4 488 aa18.57■□□□□ 0.56
SCLT1-205ENST00000503401 FTOQ9C0B1 505 aaKnown RBP eCLIP18.57■□□□□ 0.563e-8■□□□□ 9.8
SCLT1-205ENST00000503401 PDLIM7Q9NR12 457 aa18.57■□□□□ 0.56
SCLT1-205ENST00000503401 GTF2IRD1Q9UHL9 959 aa18.57■□□□□ 0.56
SCLT1-205ENST00000503401 POTEMA6NI47 508 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 CD4P01730 458 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 CLTBP09497 229 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 ATP4AP20648 1035 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 TECP42680 631 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 PLCB4Q15147 1175 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 BANK1Q8NDB2 785 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 AFAP1L1Q8TED9 768 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 SETD4Q9NVD3 440 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 TRPC6Q9Y210 931 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 MAFBQ9Y5Q3 323 aaPredicted RBP18.56■□□□□ 0.56
SCLT1-205ENST00000503401 LAMA2P24043 3122 aaKnown RBP18.56■□□□□ 0.56
SCLT1-205ENST00000503401 ZSCAN22P10073 491 aaPredicted RBP18.56■□□□□ 0.56
SCLT1-205ENST00000503401 CYP2C9P11712 490 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 PTGISQ16647 500 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 FOXD4L6Q3SYB3 417 aaPredicted RBP18.56■□□□□ 0.56
SCLT1-205ENST00000503401 FOXD4L3Q6VB84 417 aaPredicted RBP18.56■□□□□ 0.56
SCLT1-205ENST00000503401 SESTD1Q86VW0 696 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 CKAP2LQ8IYA6 745 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 CTAGE1Q96RT6 745 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 TMEM39AQ9NV64 488 aa18.56■□□□□ 0.56
SCLT1-205ENST00000503401 IGSF9BQ9UPX0 1349 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 POTEB3A0JP26 581 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 TRIM43BA6NCK2 446 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 TLR3O15455 904 aaKnown RBP18.55■□□□□ 0.56
SCLT1-205ENST00000503401 ZNF862O60290 1169 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 IGBP1P78318 339 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 PTPN11Q06124 597 aaPredicted RBP18.55■□□□□ 0.56
SCLT1-205ENST00000503401 PPFIA1Q13136 1202 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 POTEBQ6S5H4 581 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 RDM1Q8NG50 284 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 LMBR1Q8WVP7 490 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 TRIM43Q96BQ3 446 aaPredicted RBP18.55■□□□□ 0.56
SCLT1-205ENST00000503401 ZBTB10Q96DT7 871 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 SEZ6LQ9BYH1 1024 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 ZSCAN16Q9H4T2 348 aaPredicted RBP18.55■□□□□ 0.56
SCLT1-205ENST00000503401 TSHZ2Q9NRE2 1034 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 RGL1Q9NZL6 768 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 NOD1Q9Y239 953 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 CLIC4Q9Y696 253 aa18.55■□□□□ 0.56
SCLT1-205ENST00000503401 C17orf102A2RUQ5 167 aa18.54■□□□□ 0.56
SCLT1-205ENST00000503401 F13A1P00488 732 aa18.54■□□□□ 0.56
SCLT1-205ENST00000503401 ANP32AP39687 249 aaKnown RBP18.54■□□□□ 0.56
SCLT1-205ENST00000503401 CYP4A11Q02928 519 aa18.54■□□□□ 0.56
SCLT1-205ENST00000503401 CEBPZQ03701 1054 aaKnown RBP18.54■□□□□ 0.56
SCLT1-205ENST00000503401 SF3A1Q15459 793 aaKnown RBP18.54■□□□□ 0.56
SCLT1-205ENST00000503401 IL17AQ16552 155 aa18.54■□□□□ 0.56
SCLT1-205ENST00000503401 TRAPPC12Q8WVT3 735 aa18.54■□□□□ 0.56
SCLT1-205ENST00000503401 NR2E3Q9Y5X4 410 aa18.54■□□□□ 0.56
SCLT1-205ENST00000503401 H0YGN5 161 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 RBAK-RBAKDNI3L0D1 243 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 TREHO43280 583 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 INSRRP14616 1297 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 ITGB8P26012 769 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 ATP2C1P98194 919 aaPredicted RBP18.53■□□□□ 0.56
SCLT1-205ENST00000503401 PRKCEQ02156 737 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 EPHA7Q15375 998 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 GRIK4Q16099 956 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 ATP8B4Q8TF62 1192 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 ATP6V0A1Q93050 837 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 DYDC2Q96IM9 177 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 PPP1R12CQ9BZL4 782 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 WRAP73Q9P2S5 460 aaPredicted RBP18.53■□□□□ 0.56
SCLT1-205ENST00000503401 DAXXQ9UER7 740 aaPredicted RBP18.53■□□□□ 0.56
SCLT1-205ENST00000503401 TBX21Q9UL17 535 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 EVPLQ92817 2033 aa18.53■□□□□ 0.56
SCLT1-205ENST00000503401 TMEM150BA6NC51 233 aa18.52■□□□□ 0.56
SCLT1-205ENST00000503401 HOXC8P31273 242 aa18.52■□□□□ 0.56
SCLT1-205ENST00000503401 SLC26A2P50443 739 aa18.52■□□□□ 0.56
SCLT1-205ENST00000503401 CTTNQ14247 550 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms