RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 FAM160A1Q05DH4 1040 aa22.87■■□□□ 1.25
CDC42SE2-206ENST00000503291 GRB10Q13322 594 aa22.87■■□□□ 1.25
CDC42SE2-206ENST00000503291 SNW1Q13573 536 aaKnown RBP22.87■■□□□ 1.25
CDC42SE2-206ENST00000503291 PKN2Q16513 984 aaKnown RBP22.87■■□□□ 1.25
CDC42SE2-206ENST00000503291 HYIQ5T013 277 aa22.87■■□□□ 1.25
CDC42SE2-206ENST00000503291 POTEBQ6S5H4 581 aa22.87■■□□□ 1.25
CDC42SE2-206ENST00000503291 NEK9Q8TD19 979 aa22.87■■□□□ 1.25
CDC42SE2-206ENST00000503291 CDK5RAP3Q96JB5 506 aa22.87■■□□□ 1.25
CDC42SE2-206ENST00000503291 AP5M1Q9H0R1 490 aa22.87■■□□□ 1.25
CDC42SE2-206ENST00000503291 KIAA1024Q9UPX6 916 aa22.87■■□□□ 1.25
CDC42SE2-206ENST00000503291 IGKV6D-21A0A0A0MT36 114 aa22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 NR1I2O75469 434 aa22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 QARSP47897 775 aaKnown RBP22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 CCDC60Q8IWA6 550 aaPredicted RBP22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 FMR1NBQ8N0W7 255 aaPredicted RBP22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 LXNQ9BS40 222 aa22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 WRAP73Q9P2S5 460 aaPredicted RBP22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 GABBR1Q9UBS5 961 aa22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 KDM3AQ9Y4C1 1321 aa22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 BACH1O14867 736 aa22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 SLC26A4O43511 780 aa22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 PLCG1P19174 1290 aa22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 IRX5P78411 483 aaPredicted RBP22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 RRAGBQ5VZM2 374 aa22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 NT5C3AQ9H0P0 336 aa22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 DDX20Q9UHI6 824 aaKnown RBP22.86■■□□□ 1.25
CDC42SE2-206ENST00000503291 A6NJR5 290 aa22.85■■□□□ 1.25
CDC42SE2-206ENST00000503291 PPFIA4O75335 1185 aa22.85■■□□□ 1.25
CDC42SE2-206ENST00000503291 ZNF202O95125 648 aa22.85■■□□□ 1.25
CDC42SE2-206ENST00000503291 PSMC5P62195 406 aa22.85■■□□□ 1.25
CDC42SE2-206ENST00000503291 UGCGQ16739 394 aa22.85■■□□□ 1.25
CDC42SE2-206ENST00000503291 POTEGQ6S5H5 508 aa22.85■■□□□ 1.25
CDC42SE2-206ENST00000503291 DHX58Q96C10 678 aa22.85■■□□□ 1.25
CDC42SE2-206ENST00000503291 PCYT2Q99447 389 aa22.85■■□□□ 1.25
CDC42SE2-206ENST00000503291 ZSWIM4Q9H7M6 989 aa22.85■■□□□ 1.25
CDC42SE2-206ENST00000503291 DDX19AQ9NUU7 478 aaKnown RBP22.85■■□□□ 1.25
CDC42SE2-206ENST00000503291 MBD3O95983 291 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 MMP3P08254 477 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 IQUBQ8NA54 791 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 ZNF302Q9NR11 478 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 DACT1Q9NYF0 836 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 MAFBQ9Y5Q3 323 aaPredicted RBP22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 MUTP22033 750 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 GJA9P57773 515 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 E2F4Q16254 413 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 LONRF3Q496Y0 759 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 TMEM119Q4V9L6 283 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 UTP14CQ5TAP6 766 aaKnown RBP22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 LRRC15Q8TF66 581 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 ATP6V0A1Q93050 837 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 XPNPEP3Q9NQH7 507 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 PRDM10Q9NQV6 1147 aa22.84■■□□□ 1.25
CDC42SE2-206ENST00000503291 A0A087WWV3 80 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 CTAGE5O15320 804 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 MSCO60682 206 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 LGR5O75473 907 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 PGK1P00558 417 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 C6orf222P0C671 652 aaPredicted RBP22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 STAT6P42226 847 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 STAT5BP51692 787 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 DGKDQ16760 1214 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 NAALADL2Q58DX5 795 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 KCNK18Q7Z418 384 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 PYM1Q9BRP8 204 aaKnown RBP22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 AZI2Q9H6S1 392 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 SYNRGQ9UMZ2 1314 aa22.83■■□□□ 1.25
CDC42SE2-206ENST00000503291 ZNF862O60290 1169 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 MYCP01106 439 aaPredicted RBP22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 HOXD8P13378 290 aaPredicted RBP22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 CPT1AP50416 773 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 PSMC6P62333 389 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 BEX3Q00994 111 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 BRDTQ58F21 947 aaPredicted RBP22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 FAM160B1Q5W0V3 765 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 PDXDC2PQ6P474 469 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 TRIM50Q86XT4 487 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 C4orf19Q8IY42 314 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 AFAP1L1Q8TED9 768 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 GLG1Q92896 1179 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 UNC93B1Q9H1C4 597 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 SPC25Q9HBM1 224 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 WDR81Q562E7 1941 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 MTFR1Q15390 333 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 FSCN1Q16658 493 aaKnown RBP22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 TRMT1LQ7Z2T5 733 aaKnown RBP22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 UPF3AQ9H1J1 476 aaKnown RBP22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 SERTAD1Q9UHV2 236 aa22.82■■□□□ 1.24
CDC42SE2-206ENST00000503291 E9PMD0 336 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 ZBTB39O15060 712 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 DKC1O60832 514 aaKnown RBP eCLIP22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 LYPLA2O95372 231 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 GNASQ5JWF2 1037 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 LHX8Q68G74 356 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 PLPPR4Q7Z2D5 763 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 KCTD17Q8N5Z5 321 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 PIGOQ8TEQ8 1089 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 NACC1Q96RE7 527 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 SMARCAD1Q9H4L7 1026 aa22.81■■□□□ 1.24
CDC42SE2-206ENST00000503291 BLOC1S4Q9NUP1 217 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms