RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 GPCPD1Q9NPB8 672 aa5.92□□□□□ -1.46
HTT-202ENST00000502820 LMBRD1Q9NUN5 540 aa5.92□□□□□ -1.46
HTT-202ENST00000502820 DLL3Q9NYJ7 618 aa5.92□□□□□ -1.46
HTT-202ENST00000502820 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.92□□□□□ -1.46
HTT-202ENST00000502820 DBR1Q9UK59 544 aaKnown RBP5.92□□□□□ -1.46
HTT-202ENST00000502820 PRR12Q9ULL5 1215 aa5.92□□□□□ -1.46
HTT-202ENST00000502820 NAP1L2Q9ULW6 460 aaPredicted RBP5.92□□□□□ -1.46
HTT-202ENST00000502820 MRPL42Q9Y6G3 142 aaKnown RBP5.92□□□□□ -1.46
HTT-202ENST00000502820 FRMPD2Q68DX3 1309 aaPredicted RBP5.92□□□□□ -1.46
HTT-202ENST00000502820 NAV1Q8NEY1 1877 aa5.92□□□□□ -1.46
HTT-202ENST00000502820 TRANK1O15050 2925 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 IGKV6D-41A0A0C4DH26 115 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 M0R2C6 588 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 TREHO43280 583 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 REC8O95072 547 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 TUBB4AP04350 444 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 DCNP07585 359 aaKnown RBP5.91□□□□□ -1.46
HTT-202ENST00000502820 CFHP08603 1231 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 FDX1P10109 184 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 ATF7P17544 494 aaPredicted RBP5.91□□□□□ -1.46
HTT-202ENST00000502820 GNAT2P19087 354 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 PDE1AP54750 535 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 TFAP4Q01664 338 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 CAMK1Q14012 370 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 HIC1Q14526 733 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 TRIM71Q2Q1W2 868 aaKnown RBP5.91□□□□□ -1.46
HTT-202ENST00000502820 PPM1JQ5JR12 505 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 ZMYM1Q5SVZ6 1142 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 ZC3H14Q6PJT7 736 aaKnown RBP5.91□□□□□ -1.46
HTT-202ENST00000502820 TRAF7Q6Q0C0 670 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 CHD1LQ86WJ1 897 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 CCDC105Q8IYK2 499 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 THNSL1Q8IYQ7 743 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 TDRD5Q8NAT2 981 aaKnown RBP5.91□□□□□ -1.46
HTT-202ENST00000502820 VN1R2Q8NFZ6 395 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 SPPL3Q8TCT6 385 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 SECISBP2LQ93073 1101 aaKnown RBP5.91□□□□□ -1.46
HTT-202ENST00000502820 TIGD1Q96MW7 591 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 ENTPD7Q9NQZ7 604 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 TMEM260Q9NX78 707 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 MTMR4Q9NYA4 1195 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 LRFN2Q9ULH4 789 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 CA14Q9ULX7 337 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 PAXBP1Q9Y5B6 917 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 MRVI1Q9Y6F6 885 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 PLIN4Q96Q06 1357 aa5.91□□□□□ -1.46
HTT-202ENST00000502820 MYH1P12882 1939 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 ZNF318Q5VUA4 2279 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 RBM47A0AV96 593 aaKnown RBP5.9□□□□□ -1.46
HTT-202ENST00000502820 PATL2C9JE40 543 aaKnown RBP5.9□□□□□ -1.46
HTT-202ENST00000502820 KIF2AO00139 706 aaPredicted RBP5.9□□□□□ -1.46
HTT-202ENST00000502820 KINO60870 393 aaKnown RBP5.9□□□□□ -1.46
HTT-202ENST00000502820 CAVIN2O95810 425 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 ICAM1P05362 532 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 MYCLP12524 364 aaPredicted RBP5.9□□□□□ -1.46
HTT-202ENST00000502820 AOC1P19801 751 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 SDHBP21912 280 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 GATMP50440 423 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 RPS6P62753 249 aaKnown RBP5.9□□□□□ -1.46
HTT-202ENST00000502820 ARHGAP4P98171 946 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 ARHGAP1Q07960 439 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 NOLC1Q14978 699 aaKnown RBP eCLIP5.9□□□□□ -1.46
HTT-202ENST00000502820 RARS2Q5T160 578 aaKnown RBP5.9□□□□□ -1.46
HTT-202ENST00000502820 ANKRD45Q5TZF3 282 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 ARHGEF16Q5VV41 709 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 CWF19L1Q69YN2 538 aaKnown RBP5.9□□□□□ -1.46
HTT-202ENST00000502820 TTBK2Q6IQ55 1244 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 ANKRD54Q6NXT1 300 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 KANK3Q6NY19 840 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.9□□□□□ -1.46
HTT-202ENST00000502820 SESTD1Q86VW0 696 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 TICAM2Q86XR7 235 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 C12orf76Q8N812 135 aaPredicted RBP5.9□□□□□ -1.46
HTT-202ENST00000502820 GMCL1P1Q8NEA9 526 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 MORC4Q8TE76 937 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 ZFP91Q96JP5 570 aaPredicted RBP5.9□□□□□ -1.46
HTT-202ENST00000502820 SPATA33Q96N06 139 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 SEC62Q99442 399 aaKnown RBP5.9□□□□□ -1.46
HTT-202ENST00000502820 RTP3Q9BQQ7 232 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 PLVAPQ9BX97 442 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 SEMA4AQ9H3S1 761 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 POMKQ9H5K3 350 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 ZNF287Q9HBT7 754 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 ERVK-5Q9HDB9 667 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 SETD4Q9NVD3 440 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 PCDHB12Q9Y5F1 795 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 ATP6V1DQ9Y5K8 247 aa5.9□□□□□ -1.46
HTT-202ENST00000502820 TSPY2A6NKD2 308 aa5.89□□□□□ -1.47
HTT-202ENST00000502820 SMTNL1A8MU46 457 aa5.89□□□□□ -1.47
HTT-202ENST00000502820 ENPP3O14638 875 aa5.89□□□□□ -1.47
HTT-202ENST00000502820 NEMFO60524 1076 aa5.89□□□□□ -1.47
HTT-202ENST00000502820 ADRB1P08588 477 aa5.89□□□□□ -1.47
HTT-202ENST00000502820 SMIM10L2AP0DMW4 78 aa5.89□□□□□ -1.47
HTT-202ENST00000502820 SMIM10L2BP0DMW5 78 aa5.89□□□□□ -1.47
HTT-202ENST00000502820 EIF2AK2P19525 551 aaKnown RBP5.89□□□□□ -1.47
HTT-202ENST00000502820 ANAPC15P60006 121 aa5.89□□□□□ -1.47
HTT-202ENST00000502820 ERVFC1P60507 584 aa5.89□□□□□ -1.47
HTT-202ENST00000502820 SP4Q02446 784 aa5.89□□□□□ -1.47
HTT-202ENST00000502820 RBL2Q08999 1139 aa5.89□□□□□ -1.47
HTT-202ENST00000502820 LAMC2Q13753 1193 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms