RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 TIMP1P01033 207 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 ZNF286BP0CG31 522 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 STAT5BP51692 787 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 PSMC6P62333 389 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 SPIRE1Q08AE8 756 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 PTK7Q13308 1070 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 CCDC155Q8N6L0 562 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 FAM167AQ96KS9 214 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 GDF15Q99988 308 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 VAV3Q9UKW4 847 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 PPME1Q9Y570 386 aa12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 MORC2Q9Y6X9 1032 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-212ENST00000502563 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 KIF28PB7ZC32 967 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 DKC1O60832 514 aaKnown RBP eCLIP12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 MUTP22033 750 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 PRPHP41219 470 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 BFSP2Q13515 415 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 GNL2Q13823 731 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 MFSD5Q6N075 450 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 TAF2Q6P1X5 1199 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 SERINC5Q86VE9 423 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 CCDC60Q8IWA6 550 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 ZNF710Q8N1W2 664 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 NEK9Q8TD19 979 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 ATP8B4Q8TF62 1192 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 GLG1Q92896 1179 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 ATP6V0A1Q93050 837 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 CTAGE1Q96RT6 745 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 ZNF302Q9NR11 478 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 DISC1Q9NRI5 854 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 TMEM39AQ9NV64 488 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 HDAC6Q9UBN7 1215 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 CEP131Q9UPN4 1083 aa12.1□□□□□ -0.47
UBE2D3-212ENST00000502563 C17orf102A2RUQ5 167 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 FAM205CA6NFA0 338 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 H0YGN5 161 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 HBP1O60381 514 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 BMP15O95972 392 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 PFKMP08237 780 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 SMIM10L2AP0DMW4 78 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 SMIM10L2BP0DMW5 78 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 RFC2P35250 354 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 GUCY1B3Q02153 619 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 PTGISQ16647 500 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 TTC38Q5R3I4 469 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 GDF6Q6KF10 455 aaPredicted RBP12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 KCTD17Q8N5Z5 321 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 NOC4LQ9BVI4 516 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 HIPK3Q9H422 1215 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 RNPEPQ9H4A4 650 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 ZSCAN16Q9H4T2 348 aaPredicted RBP12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 PKD2L1Q9P0L9 805 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 PCDHA12Q9UN75 941 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 TELO2Q9Y4R8 837 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 CEP290O15078 2479 aa12.09□□□□□ -0.47
UBE2D3-212ENST00000502563 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 DTNBO60941 627 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 LYPLA2O95372 231 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 P4HBP07237 508 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 RAG1P15918 1043 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 SYT1P21579 422 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 TOB1P50616 345 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 PDIA5Q14554 519 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 PLCB4Q15147 1175 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 EPHA7Q15375 998 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 CALCRLQ16602 461 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 ARL6IP4Q66PJ3 421 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 TRIM50Q86XT4 487 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 UNC45AQ9H3U1 944 aa12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 TRMT13Q9NUP7 481 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-212ENST00000502563 MYH9P35579 1960 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 WNT7AO00755 349 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 STX6O43752 255 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 OR52Z1P0C646 297 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 CLCN6P51797 869 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 PSMC5P62195 406 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 SP4Q02446 784 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 PPFIA1Q13136 1202 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 TRIM71Q2Q1W2 868 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 FAM47CQ5HY64 1035 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 ZNF484Q5JVG2 852 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 UTP14CQ5TAP6 766 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 SWSAP1Q6NVH7 229 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 PDXDC2PQ6P474 469 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 MIER3Q7Z3K6 550 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 SH3RF1Q7Z6J0 888 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 C4orf19Q8IY42 314 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 EXOC8Q8IYI6 725 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 TMEM199Q8N511 208 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 C4orf32Q8N8J7 132 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 LMBR1Q8WVP7 490 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 HSD17B14Q9BPX1 270 aa12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 LBHD1Q9BQE6 289 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-212ENST00000502563 NIFKQ9BYG3 293 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms