RNA–Protein interactions for RNA: ENST00000500197.6

LINC00461-201, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best) BASIC

Gene LINC00461, Length 3,381 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-201ENST00000500197 KIF11P52732 1056 aa10.88□□□□□ -0.67
LINC00461-201ENST00000500197 SF3B2Q13435 895 aaKnown RBP10.88□□□□□ -0.67
LINC00461-201ENST00000500197 TERF2Q15554 542 aa10.88□□□□□ -0.67
LINC00461-201ENST00000500197 KIAA1755Q5JYT7 1200 aa10.88□□□□□ -0.67
LINC00461-201ENST00000500197 KRT26Q7Z3Y9 468 aa10.88□□□□□ -0.67
LINC00461-201ENST00000500197 CTAGE6Q86UF2 777 aa10.88□□□□□ -0.67
LINC00461-201ENST00000500197 CTAGE4Q8IX94 777 aa10.88□□□□□ -0.67
LINC00461-201ENST00000500197 LPAR1Q92633 364 aa10.88□□□□□ -0.67
LINC00461-201ENST00000500197 CSRNP1Q96S65 589 aa10.88□□□□□ -0.67
LINC00461-201ENST00000500197 DBR1Q9UK59 544 aaKnown RBP10.88□□□□□ -0.67
LINC00461-201ENST00000500197 PCDHGC5Q9Y5F6 944 aa10.88□□□□□ -0.67
LINC00461-201ENST00000500197 SAR1BQ9Y6B6 198 aa10.88□□□□□ -0.67
LINC00461-201ENST00000500197 MYH11P35749 1972 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 E9PMD0 336 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 TULP1O00294 542 aaPredicted RBP10.87□□□□□ -0.67
LINC00461-201ENST00000500197 SHROOM1Q2M3G4 852 aaPredicted RBP10.87□□□□□ -0.67
LINC00461-201ENST00000500197 WDR18Q9BV38 432 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 TRIM34Q9BYJ4 488 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 TDRD3Q9H7E2 651 aaKnown RBP10.87□□□□□ -0.67
LINC00461-201ENST00000500197 ARFGAP3Q9NP61 516 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 STK32BQ9NY57 414 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 SNX12Q9UMY4 172 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 A0A0A6YYK5 440 aaPredicted RBP10.87□□□□□ -0.67
LINC00461-201ENST00000500197 ICAM1P05362 532 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 RFX1P22670 979 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 EPHA7Q15375 998 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 TTLL6Q8N841 843 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 HPS3Q969F9 1004 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 VTI1AQ96AJ9 217 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 EIF2AK1Q9BQI3 630 aaKnown RBP10.87□□□□□ -0.67
LINC00461-201ENST00000500197 FGFBP2Q9BYJ0 223 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 LACRTQ9GZZ8 138 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.87□□□□□ -0.67
LINC00461-201ENST00000500197 TMOD2Q9NZR1 351 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 PRDM4Q9UKN5 801 aa10.87□□□□□ -0.67
LINC00461-201ENST00000500197 V9GYY5 206 aaPredicted RBP10.87□□□□□ -0.67
LINC00461-201ENST00000500197 LRRC53A6NM62 1247 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 TLR2O60603 784 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 USO1O60763 962 aaKnown RBP10.86□□□□□ -0.67
LINC00461-201ENST00000500197 SASH3O75995 380 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 ZBTB48P10074 688 aaPredicted RBP10.86□□□□□ -0.67
LINC00461-201ENST00000500197 RPS12P25398 132 aaKnown RBP10.86□□□□□ -0.67
LINC00461-201ENST00000500197 PRELPP51888 382 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 CCDC122Q5T0U0 273 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 IQCEQ6IPM2 695 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 XRRA1Q6P2D8 792 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 GLIS3Q8NEA6 775 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 NEK11Q8NG66 645 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 OLIG1Q8TAK6 271 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 SECISBP2LQ93073 1101 aaKnown RBP10.86□□□□□ -0.67
LINC00461-201ENST00000500197 SENP7Q9BQF6 1050 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 REEP2Q9BRK0 252 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 GRID2IPA4D2P6 1211 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 TGFB2P61812 414 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 KIF5AQ12840 1032 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 RASA3Q14644 834 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 GLE1Q53GS7 698 aaKnown RBP10.86□□□□□ -0.67
LINC00461-201ENST00000500197 DYMQ7RTS9 669 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 SYT11Q9BT88 431 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 ZNRF3Q9ULT6 936 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 COL11A1P12107 1806 aaPredicted RBP10.86□□□□□ -0.67
LINC00461-201ENST00000500197 GCOM1H8Y6P7 765 aaPredicted RBP10.86□□□□□ -0.67
LINC00461-201ENST00000500197 PPIP5K2O43314 1243 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 ERLIN1O75477 346 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 SLITRK3O94933 977 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 POLR2MP0CAP2 368 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 TCP1P17987 556 aaKnown RBP10.86□□□□□ -0.67
LINC00461-201ENST00000500197 NPEPPSP55786 919 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 PPP2R5AQ15172 486 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 NAB2Q15742 525 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 SLC18A3Q16572 532 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 RINT1Q6NUQ1 792 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 CREG2Q8IUH2 290 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 GOLGA5Q8TBA6 731 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 PKNOX2Q96KN3 472 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 CCDC42Q96M95 316 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 KIAA1683Q9H0B3 1180 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 SIX2Q9NPC8 291 aa10.86□□□□□ -0.67
LINC00461-201ENST00000500197 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC00461-201ENST00000500197 CETN3O15182 167 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 WDR46O15213 610 aaKnown RBP10.85□□□□□ -0.67
LINC00461-201ENST00000500197 ATP1A1P05023 1023 aaKnown RBP10.85□□□□□ -0.67
LINC00461-201ENST00000500197 CHRNA5P30532 468 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 LONRF2Q1L5Z9 754 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 FAM83BQ5T0W9 1011 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 RDM1Q8NG50 284 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 UBIAD1Q9Y5Z9 338 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 RPL13P26373 211 aaKnown RBP10.85□□□□□ -0.67
LINC00461-201ENST00000500197 SPA17Q15506 151 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 CLEC4DQ8WXI8 215 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 TEPSINQ96N21 525 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 PNKPQ96T60 521 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 ZNF112Q9UJU3 913 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 MTMR7Q9Y216 660 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 SMCHD1A6NHR9 2005 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 ZC3H4Q9UPT8 1303 aaKnown RBP10.85□□□□□ -0.67
LINC00461-201ENST00000500197 POTEFA5A3E0 1075 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 P4HA2O15460 535 aa10.85□□□□□ -0.67
LINC00461-201ENST00000500197 IPO7O95373 1038 aaKnown RBP10.85□□□□□ -0.67
LINC00461-201ENST00000500197 POTEIP0CG38 1075 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms