RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 CUL5Q93034 780 aa16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 AGO3Q9H9G7 860 aaKnown RBP16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 TUBE1Q9UJT0 475 aa16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 WDR81Q562E7 1941 aa16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 MYH9P35579 1960 aaKnown RBP16.87■□□□□ 0.29
SEC61A1-207ENST00000498837 ZDBF2Q9HCK1 2354 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 MYO10Q9HD67 2058 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 MBLAC1A4D2B0 266 aaPredicted RBP16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 PIK3CDO00329 1044 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 MMP1P03956 469 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 GSPT1P15170 499 aaKnown RBP16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 DNAJB1P25685 340 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 ADAM15Q13444 863 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 SART3Q15020 963 aaKnown RBP16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 TSHZ1Q6ZSZ6 1077 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 RALYLQ86SE5 291 aaKnown RBP16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 RSPH3Q86UC2 560 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 RNF135Q8IUD6 432 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 GIMAP8Q8ND71 665 aaPredicted RBP16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 SEPT1Q8WYJ6 367 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 GPRASP2Q96D09 838 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 RRP36Q96EU6 259 aaKnown RBP16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 MYL10Q9BUA6 226 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 SPZ1Q9BXG8 430 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 KCNH6Q9H252 994 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 PKD2L1Q9P0L9 805 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 CD207Q9UJ71 328 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 PLAGL2Q9UPG8 496 aa16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 MRPL42Q9Y6G3 142 aaKnown RBP16.86■□□□□ 0.29
SEC61A1-207ENST00000498837 KMT2EQ8IZD2 1858 aa16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 STXBP3O00186 592 aa16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 ITGB5P18084 799 aa16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 CD52P31358 61 aa16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 IGBP1P78318 339 aa16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 SMAD4Q13485 552 aaKnown RBP16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 HERC4Q5GLZ8 1057 aaPredicted RBP16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 ADGRD2Q7Z7M1 963 aa16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 CRIPAKQ8N1N5 446 aa16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 EXOC6Q8TAG9 804 aa16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 GLG1Q92896 1179 aa16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 POP1Q99575 1024 aaKnown RBP16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 PLVAPQ9BX97 442 aa16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 ERAP1Q9NZ08 941 aa16.85■□□□□ 0.29
SEC61A1-207ENST00000498837 ITGB1P05556 798 aa16.84■□□□□ 0.29
SEC61A1-207ENST00000498837 PDE4AP27815 886 aa16.84■□□□□ 0.29
SEC61A1-207ENST00000498837 MRPS6P82932 125 aaKnown RBP16.84■□□□□ 0.29
SEC61A1-207ENST00000498837 TTC22Q5TAA0 569 aa16.84■□□□□ 0.29
SEC61A1-207ENST00000498837 MB21D2Q8IYB1 491 aaPredicted RBP16.84■□□□□ 0.29
SEC61A1-207ENST00000498837 ZNF654Q8IZM8 581 aa16.84■□□□□ 0.29
SEC61A1-207ENST00000498837 SPPL3Q8TCT6 385 aa16.84■□□□□ 0.29
SEC61A1-207ENST00000498837 P2RX5Q93086 422 aa16.84■□□□□ 0.29
SEC61A1-207ENST00000498837 MSLNLQ96KJ4 702 aa16.84■□□□□ 0.29
SEC61A1-207ENST00000498837 FAM49AQ9H0Q0 323 aaPredicted RBP16.84■□□□□ 0.29
SEC61A1-207ENST00000498837 SMARCAD1Q9H4L7 1026 aa16.84■□□□□ 0.29
SEC61A1-207ENST00000498837 PLEKHA8P1O95397 391 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 INSRRP14616 1297 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 CHMLP26374 656 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 NDUFV1P49821 464 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 TMEM62Q0P6H9 643 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 PAN2Q504Q3 1202 aaKnown RBP16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 CMTR1Q8N1G2 835 aaKnown RBP16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 SRBD1Q8N5C6 995 aaKnown RBP16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 KLHL23Q8NBE8 558 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 CTCFLQ8NI51 663 aaPredicted RBP16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 MFSD14AQ96MC6 490 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 PCYT2Q99447 389 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 MAP3K14Q99558 947 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 LY9Q9HBG7 655 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 CLEC1BQ9P126 229 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 SEC63Q9UGP8 760 aaKnown RBP16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 UBIAD1Q9Y5Z9 338 aa16.83■□□□□ 0.28
SEC61A1-207ENST00000498837 GATMP50440 423 aa16.82■□□□□ 0.28
SEC61A1-207ENST00000498837 UBE2SQ16763 222 aa16.82■□□□□ 0.28
SEC61A1-207ENST00000498837 CMTR2Q8IYT2 770 aaKnown RBP16.82■□□□□ 0.28
SEC61A1-207ENST00000498837 TRAPPC12Q8WVT3 735 aa16.82■□□□□ 0.28
SEC61A1-207ENST00000498837 RUFY2Q8WXA3 655 aa16.82■□□□□ 0.28
SEC61A1-207ENST00000498837 EDAQ92838 391 aa16.82■□□□□ 0.28
SEC61A1-207ENST00000498837 CDHR1Q96JP9 859 aa16.82■□□□□ 0.28
SEC61A1-207ENST00000498837 PSTPIP2Q9H939 334 aa16.82■□□□□ 0.28
SEC61A1-207ENST00000498837 PADI3Q9ULW8 664 aa16.82■□□□□ 0.28
SEC61A1-207ENST00000498837 hCG_1642624A0A1W2PR95 340 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 RRN3P2A6NIE6 340 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 DDAH1O94760 285 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 EYA4O95677 639 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 SMARCA1P28370 1054 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 KIF5BP33176 963 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 NRIP1P48552 1158 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 MTMR1Q13613 665 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 NAALADL2Q58DX5 795 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 IER5Q5VY09 327 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 RBM23Q86U06 439 aaKnown RBP16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 POF1BQ8WVV4 589 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 PHOX2BQ99453 314 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 PCDHGC5Q9Y5F6 944 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 TRPV2Q9Y5S1 764 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 SQORQ9Y6N5 450 aa16.81■□□□□ 0.28
SEC61A1-207ENST00000498837 RXRAP19793 462 aa16.8■□□□□ 0.28
SEC61A1-207ENST00000498837 COL9A3Q14050 684 aaPredicted RBP16.8■□□□□ 0.28
SEC61A1-207ENST00000498837 EFHBQ8N7U6 833 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms