RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 GSPT1P15170 499 aaKnown RBP16.92■□□□□ 0.3
TRAF4-212ENST00000498540 ANTXR2P58335 489 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 HERC4Q5GLZ8 1057 aaPredicted RBP16.92■□□□□ 0.3
TRAF4-212ENST00000498540 TSHZ1Q6ZSZ6 1077 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 CATIPQ7Z7H3 387 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 RALYLQ86SE5 291 aaKnown RBP16.92■□□□□ 0.3
TRAF4-212ENST00000498540 RSPH3Q86UC2 560 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 RNF135Q8IUD6 432 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 GIMAP8Q8ND71 665 aaPredicted RBP16.92■□□□□ 0.3
TRAF4-212ENST00000498540 CUL5Q93034 780 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 MYL10Q9BUA6 226 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 SPZ1Q9BXG8 430 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 CD207Q9UJ71 328 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 PLAGL2Q9UPG8 496 aa16.92■□□□□ 0.3
TRAF4-212ENST00000498540 MRPL42Q9Y6G3 142 aaKnown RBP16.92■□□□□ 0.3
TRAF4-212ENST00000498540 PLXNA4Q9HCM2 1894 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 ITGB5P18084 799 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 DNAJB1P25685 340 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 CD52P31358 61 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 ADAM15Q13444 863 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 SART3Q15020 963 aaKnown RBP16.91■□□□□ 0.3
TRAF4-212ENST00000498540 ADGRD2Q7Z7M1 963 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 NCOA7Q8NI08 942 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 IGDCC4Q8TDY8 1250 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 SEPT1Q8WYJ6 367 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 GPRASP2Q96D09 838 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 RRP36Q96EU6 259 aaKnown RBP16.91■□□□□ 0.3
TRAF4-212ENST00000498540 PLVAPQ9BX97 442 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 ERAP1Q9NZ08 941 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 PKD2L1Q9P0L9 805 aa16.91■□□□□ 0.3
TRAF4-212ENST00000498540 STXBP3O00186 592 aa16.9■□□□□ 0.3
TRAF4-212ENST00000498540 ITGB1P05556 798 aa16.9■□□□□ 0.3
TRAF4-212ENST00000498540 NDUFV1P49821 464 aa16.9■□□□□ 0.3
TRAF4-212ENST00000498540 IGBP1P78318 339 aa16.9■□□□□ 0.3
TRAF4-212ENST00000498540 MRPS6P82932 125 aaKnown RBP16.9■□□□□ 0.3
TRAF4-212ENST00000498540 RTN4RL1Q86UN2 441 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-212ENST00000498540 CRIPAKQ8N1N5 446 aa16.9■□□□□ 0.3
TRAF4-212ENST00000498540 GLG1Q92896 1179 aa16.9■□□□□ 0.3
TRAF4-212ENST00000498540 P2RX5Q93086 422 aa16.9■□□□□ 0.3
TRAF4-212ENST00000498540 MSLNLQ96KJ4 702 aa16.9■□□□□ 0.3
TRAF4-212ENST00000498540 FAM49AQ9H0Q0 323 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-212ENST00000498540 PDE4AP27815 886 aa16.89■□□□□ 0.29
TRAF4-212ENST00000498540 PAN2Q504Q3 1202 aaKnown RBP16.89■□□□□ 0.29
TRAF4-212ENST00000498540 MB21D2Q8IYB1 491 aaPredicted RBP16.89■□□□□ 0.29
TRAF4-212ENST00000498540 CMTR2Q8IYT2 770 aaKnown RBP16.89■□□□□ 0.29
TRAF4-212ENST00000498540 ZNF654Q8IZM8 581 aa16.89■□□□□ 0.29
TRAF4-212ENST00000498540 SPPL3Q8TCT6 385 aa16.89■□□□□ 0.29
TRAF4-212ENST00000498540 MFSD14AQ96MC6 490 aa16.89■□□□□ 0.29
TRAF4-212ENST00000498540 LY9Q9HBG7 655 aa16.89■□□□□ 0.29
TRAF4-212ENST00000498540 CLEC1BQ9P126 229 aa16.89■□□□□ 0.29
TRAF4-212ENST00000498540 SEC63Q9UGP8 760 aaKnown RBP16.89■□□□□ 0.29
TRAF4-212ENST00000498540 PLEKHA8P1O95397 391 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 EYA4O95677 639 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 INSRRP14616 1297 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 TMEM62Q0P6H9 643 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 MTMR1Q13613 665 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 UBE2SQ16763 222 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 TTC22Q5TAA0 569 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 NPAS4Q8IUM7 802 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 CMTR1Q8N1G2 835 aaKnown RBP16.88■□□□□ 0.29
TRAF4-212ENST00000498540 KLHL23Q8NBE8 558 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 CTCFLQ8NI51 663 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-212ENST00000498540 EXOC6Q8TAG9 804 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 EDAQ92838 391 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 CDHR1Q96JP9 859 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 PCYT2Q99447 389 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 MAP3K14Q99558 947 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 SMARCAD1Q9H4L7 1026 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 PCDHGC5Q9Y5F6 944 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 UBIAD1Q9Y5Z9 338 aa16.88■□□□□ 0.29
TRAF4-212ENST00000498540 DDAH1O94760 285 aa16.87■□□□□ 0.29
TRAF4-212ENST00000498540 GLP2RO95838 553 aa16.87■□□□□ 0.29
TRAF4-212ENST00000498540 CHMLP26374 656 aa16.87■□□□□ 0.29
TRAF4-212ENST00000498540 KIF5BP33176 963 aa16.87■□□□□ 0.29
TRAF4-212ENST00000498540 GATMP50440 423 aa16.87■□□□□ 0.29
TRAF4-212ENST00000498540 SRBD1Q8N5C6 995 aaKnown RBP16.87■□□□□ 0.29
TRAF4-212ENST00000498540 EFHBQ8N7U6 833 aa16.87■□□□□ 0.29
TRAF4-212ENST00000498540 SMRP1Q8NCR6 262 aa16.87■□□□□ 0.29
TRAF4-212ENST00000498540 TRAPPC12Q8WVT3 735 aa16.87■□□□□ 0.29
TRAF4-212ENST00000498540 PHOX2BQ99453 314 aa16.87■□□□□ 0.29
TRAF4-212ENST00000498540 PSTPIP2Q9H939 334 aa16.87■□□□□ 0.29
TRAF4-212ENST00000498540 TRPV2Q9Y5S1 764 aa16.87■□□□□ 0.29
TRAF4-212ENST00000498540 FNDC1Q4ZHG4 1894 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-212ENST00000498540 KMT2EQ8IZD2 1858 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 SMARCA1P28370 1054 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 NRIP1P48552 1158 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 NAALADL2Q58DX5 795 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 IER5Q5VY09 327 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 PRSS33Q8NF86 280 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 POF1BQ8WVV4 589 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 RUFY2Q8WXA3 655 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 PPP2R3CQ969Q6 453 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 FTHL17Q9BXU8 183 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 PADI3Q9ULW8 664 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 BARX2Q9UMQ3 279 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-212ENST00000498540 SQORQ9Y6N5 450 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 IGSF9BQ9UPX0 1349 aa16.86■□□□□ 0.29
TRAF4-212ENST00000498540 hCG_1642624A0A1W2PR95 340 aa16.85■□□□□ 0.29
TRAF4-212ENST00000498540 RRN3P2A6NIE6 340 aa16.85■□□□□ 0.29
TRAF4-212ENST00000498540 SCG2P13521 617 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms