RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 PAGE5Q96GU1 130 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 SPATA16Q9BXB7 569 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 C14orf93Q9H972 538 aaKnown RBP12.63□□□□□ -0.39
PBX1-211ENST00000498497 SUCLA2Q9P2R7 463 aaPredicted RBP12.63□□□□□ -0.39
PBX1-211ENST00000498497 DBNLQ9UJU6 430 aaKnown RBP12.63□□□□□ -0.39
PBX1-211ENST00000498497 SH3GLB1Q9Y371 365 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 HMGB1P09429 215 aaKnown RBP12.63□□□□□ -0.39
PBX1-211ENST00000498497 FGFR4P22455 802 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 ITGA6P23229 1130 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 PIP4K2AP48426 406 aaPredicted RBP12.63□□□□□ -0.39
PBX1-211ENST00000498497 PLTPP55058 493 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 OXCT1P55809 520 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 PPP2R5CQ13362 524 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 ZNF362Q5T0B9 420 aaPredicted RBP12.63□□□□□ -0.39
PBX1-211ENST00000498497 NKX2-3Q8TAU0 364 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.63□□□□□ -0.39
PBX1-211ENST00000498497 MRRFQ96E11 262 aaKnown RBP12.63□□□□□ -0.39
PBX1-211ENST00000498497 ZKSCAN3Q9BRR0 538 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 SH2D4AQ9H788 454 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 KANSL2Q9H9L4 492 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 WASF2Q9Y6W5 498 aa12.63□□□□□ -0.39
PBX1-211ENST00000498497 H0YGN5 161 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 EPHB6O15197 1021 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 XPOTO43592 962 aaKnown RBP12.62□□□□□ -0.39
PBX1-211ENST00000498497 BIRC3Q13489 604 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 ZNF174Q15697 407 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 PPFIBP2Q8ND30 876 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 TAF4BQ92750 862 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 LENG1Q96BZ8 264 aaPredicted RBP12.62□□□□□ -0.39
PBX1-211ENST00000498497 KRT23Q9C075 422 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
PBX1-211ENST00000498497 HPS5Q9UPZ3 1129 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 NFS1Q9Y697 457 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 PPP6R2O75170 966 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 HSPD1P10809 573 aaKnown RBP12.62□□□□□ -0.39
PBX1-211ENST00000498497 HSPA9P38646 679 aaKnown RBP12.62□□□□□ -0.39
PBX1-211ENST00000498497 KCNMA1Q12791 1236 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 TFCP2Q12800 502 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 MAP7Q14244 749 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 U2AF1L4Q8WU68 220 aaKnown RBP12.62□□□□□ -0.39
PBX1-211ENST00000498497 ZNF653Q96CK0 615 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 TCHPQ9BT92 498 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 ARHGEF3Q9NR81 526 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 TMCO1Q9UM00 188 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 MAP3K2Q9Y2U5 619 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 TTLL13PA6NNM8 815 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 EXOSC10Q01780 885 aaKnown RBP12.62□□□□□ -0.39
PBX1-211ENST00000498497 PLS1Q14651 629 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 FBXO31Q5XUX0 539 aaPredicted RBP12.62□□□□□ -0.39
PBX1-211ENST00000498497 SCYL3Q8IZE3 742 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 RBBP8NLQ8NC74 664 aaPredicted RBP12.62□□□□□ -0.39
PBX1-211ENST00000498497 ASAP3Q8TDY4 903 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 SUCLG2Q96I99 432 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 TTC1Q99614 292 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 TANGO6Q9C0B7 1094 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 KIAA1683Q9H0B3 1180 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 RABL2AQ9UBK7 228 aaPredicted RBP12.62□□□□□ -0.39
PBX1-211ENST00000498497 RNF14Q9UBS8 474 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 SLC4A4Q9Y6R1 1079 aa12.62□□□□□ -0.39
PBX1-211ENST00000498497 GLI2P10070 1586 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 MYH7P12883 1935 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 TMEM221A6NGB7 291 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 DKC1O60832 514 aaKnown RBP eCLIP12.61□□□□□ -0.39
PBX1-211ENST00000498497 KRT38O76015 456 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 VCAM1P19320 739 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 RASA1P20936 1047 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 PRCPP42785 496 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 MTTPP55157 894 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 BNIP1Q12981 228 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 TTLL12Q14166 644 aaPredicted RBP12.61□□□□□ -0.39
PBX1-211ENST00000498497 KLHDC7AQ5VTJ3 777 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 NRG4Q8WWG1 115 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 PTPRN2Q92932 1015 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 KCNN1Q92952 543 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 PUS7Q96PZ0 661 aaKnown RBP12.61□□□□□ -0.39
PBX1-211ENST00000498497 SMC6Q96SB8 1091 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 TBC1D10AQ9BXI6 508 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 ARMC7Q9H6L4 198 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 KLHL14Q9P2G3 628 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 HSFX1Q9UBD0 423 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 TMEM247A6NEH6 219 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 KCNQ3O43525 872 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 NAT2P11245 290 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 MYCLP1P12525 358 aaPredicted RBP12.61□□□□□ -0.39
PBX1-211ENST00000498497 ATP6V1B1P15313 513 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 TOB1P50616 345 aaPredicted RBP12.61□□□□□ -0.39
PBX1-211ENST00000498497 TNNC1P63316 161 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 SGSM1Q2NKQ1 1148 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 IRGCQ6NXR0 463 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 DSTYKQ6XUX3 929 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 ZNF554Q86TJ5 538 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 CCDC65Q8IXS2 484 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 SPOCK2Q92563 424 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 CCDC127Q96BQ5 260 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 ZNF274Q96GC6 653 aaPredicted RBP12.61□□□□□ -0.39
PBX1-211ENST00000498497 PBKQ96KB5 322 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 NOX5Q96PH1 765 aa12.61□□□□□ -0.39
PBX1-211ENST00000498497 LRRC27Q9C0I9 530 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms