RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 RIT2Q99578 217 aa14.49□□□□□ -0.09
HSPG2-213ENST00000498495 NAP1L4Q99733 375 aaKnown RBP14.49□□□□□ -0.09
HSPG2-213ENST00000498495 ZNF302Q9NR11 478 aa14.49□□□□□ -0.09
HSPG2-213ENST00000498495 DDX25Q9UHL0 483 aaKnown RBP14.49□□□□□ -0.09
HSPG2-213ENST00000498495 PCDHA10Q9Y5I2 948 aa14.49□□□□□ -0.09
HSPG2-213ENST00000498495 IGKV6D-21A0A0A0MT36 114 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 RRN3P2A6NIE6 340 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 BTBD18B2RXH4 712 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 CCNT1O60563 726 aaKnown RBP14.48□□□□□ -0.09
HSPG2-213ENST00000498495 GAS7O60861 476 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 PARNO95453 639 aaKnown RBP14.48□□□□□ -0.09
HSPG2-213ENST00000498495 PSAPP07602 524 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 PFKMP08237 780 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 INSRRP14616 1297 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 HOXC8P31273 242 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 THPOP40225 353 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 SLC26A2P50443 739 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 RBL2Q08999 1139 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 PLCB4Q15147 1175 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 GRIK4Q16099 956 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 LRCH2Q5VUJ6 765 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 LRRC8DQ7L1W4 858 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 OTOP2Q7RTS6 562 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 SMAP1Q8IYB5 467 aaPredicted RBP14.48□□□□□ -0.09
HSPG2-213ENST00000498495 DIS3L2Q8IYB7 885 aaKnown RBP14.48□□□□□ -0.09
HSPG2-213ENST00000498495 SLC5A5Q92911 643 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 MBOAT7Q96N66 472 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 TEKT3Q9BXF9 490 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 FTOQ9C0B1 505 aaKnown RBP eCLIP14.48□□□□□ -0.09
HSPG2-213ENST00000498495 MTIF3Q9H2K0 278 aaKnown RBP14.48□□□□□ -0.09
HSPG2-213ENST00000498495 TRPC6Q9Y210 931 aa14.48□□□□□ -0.09
HSPG2-213ENST00000498495 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.47□□□□□ -0.09
HSPG2-213ENST00000498495 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.47□□□□□ -0.09
HSPG2-213ENST00000498495 POTEB3A0JP26 581 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 MARCH6O60337 910 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 ACTN1P12814 892 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 GCFC2P16383 781 aaKnown RBP14.47□□□□□ -0.09
HSPG2-213ENST00000498495 IGBP1P78318 339 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 ADAM17P78536 824 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 GUCY1B3Q02153 619 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 TRIM71Q2Q1W2 868 aaKnown RBP14.47□□□□□ -0.09
HSPG2-213ENST00000498495 EARS2Q5JPH6 523 aaKnown RBP14.47□□□□□ -0.09
HSPG2-213ENST00000498495 ZNF618Q5T7W0 954 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 PPP4R3AQ6IN85 833 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 PDXDC2PQ6P474 469 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 POTEBQ6S5H4 581 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 CKAP2LQ8IYA6 745 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 LMBR1Q8WVP7 490 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 HERVK_113Q902F9 699 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 WNT8BQ93098 351 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 GJA10Q969M2 543 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 TMX3Q96JJ7 454 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 DISC1Q9NRI5 854 aa14.47□□□□□ -0.09
HSPG2-213ENST00000498495 WDR64B1ANS9 1081 aa14.46□□□□□ -0.09
HSPG2-213ENST00000498495 RSPH10B2B2RC85 870 aa14.46□□□□□ -0.09
HSPG2-213ENST00000498495 CHMP2AO43633 222 aa14.46□□□□□ -0.09
HSPG2-213ENST00000498495 HBP1O60381 514 aa14.46□□□□□ -0.09
HSPG2-213ENST00000498495 PSMD10O75832 226 aa14.46□□□□□ -0.09
HSPG2-213ENST00000498495 RSPH10BP0C881 870 aa14.46□□□□□ -0.09
HSPG2-213ENST00000498495 SFNP31947 248 aa14.46□□□□□ -0.09
HSPG2-213ENST00000498495 TAF2Q6P1X5 1199 aa14.46□□□□□ -0.09
HSPG2-213ENST00000498495 CCDC60Q8IWA6 550 aaPredicted RBP14.46□□□□□ -0.09
HSPG2-213ENST00000498495 TNFRSF25Q93038 417 aa14.46□□□□□ -0.09
HSPG2-213ENST00000498495 GABBR1Q9UBS5 961 aa14.46□□□□□ -0.09
HSPG2-213ENST00000498495 FAM205CA6NFA0 338 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 ZBBXA8MT70 800 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 SLC37A4O43826 429 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 CAND2O75155 1236 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 CD2BP2O95400 341 aaKnown RBP14.45□□□□□ -0.1
HSPG2-213ENST00000498495 BAG4O95429 457 aaKnown RBP14.45□□□□□ -0.1
HSPG2-213ENST00000498495 JAK3P52333 1124 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 SMAD3P84022 425 aaKnown RBP14.45□□□□□ -0.1
HSPG2-213ENST00000498495 GNL2Q13823 731 aaKnown RBP14.45□□□□□ -0.1
HSPG2-213ENST00000498495 RASIP1Q5U651 963 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 GPR153Q6NV75 609 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 TRMT1LQ7Z2T5 733 aaKnown RBP14.45□□□□□ -0.1
HSPG2-213ENST00000498495 MIER3Q7Z3K6 550 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 RSPH3Q86UC2 560 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 FBXO18Q8NFZ0 1043 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 ATP8B4Q8TF62 1192 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 VWCEQ96DN2 955 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 FAM20AQ96MK3 541 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 UNC45AQ9H3U1 944 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 TUBE1Q9UJT0 475 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 KIF3AQ9Y496 699 aa14.45□□□□□ -0.1
HSPG2-213ENST00000498495 MAFBQ9Y5Q3 323 aaPredicted RBP14.45□□□□□ -0.1
HSPG2-213ENST00000498495 TRIP12Q14669 1992 aaPredicted RBP14.45□□□□□ -0.1
HSPG2-213ENST00000498495 TBX3O15119 743 aa14.44□□□□□ -0.1
HSPG2-213ENST00000498495 NBNO60934 754 aa14.44□□□□□ -0.1
HSPG2-213ENST00000498495 ATP4AP20648 1035 aa14.44□□□□□ -0.1
HSPG2-213ENST00000498495 GPNMBQ14956 572 aa14.44□□□□□ -0.1
HSPG2-213ENST00000498495 ZNF484Q5JVG2 852 aa14.44□□□□□ -0.1
HSPG2-213ENST00000498495 MARCH8Q5T0T0 291 aa14.44□□□□□ -0.1
HSPG2-213ENST00000498495 RDM1Q8NG50 284 aa14.44□□□□□ -0.1
HSPG2-213ENST00000498495 ETNPPLQ8TBG4 499 aa14.44□□□□□ -0.1
HSPG2-213ENST00000498495 DNAJB3Q8WWF6 145 aa14.44□□□□□ -0.1
HSPG2-213ENST00000498495 BBXQ8WY36 941 aaPredicted RBP14.44□□□□□ -0.1
HSPG2-213ENST00000498495 NRBP2Q9NSY0 501 aa14.44□□□□□ -0.1
HSPG2-213ENST00000498495 CXXC1Q9P0U4 656 aaPredicted RBP14.44□□□□□ -0.1
HSPG2-213ENST00000498495 SLC4A7Q9Y6M7 1214 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms