RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 SUN3Q8TAQ9 357 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 KLHDC4Q8TBB5 520 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 LRRC8CQ8TDW0 803 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 FAM151AQ8WW52 585 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 LPAR1Q92633 364 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PBXIP1Q96AQ6 731 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CDX2Q99626 313 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 DSCC1Q9BVC3 393 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 OXCT2Q9BYC2 517 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 SLC9A2Q9UBY0 812 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 GTF2IRD1Q9UHL9 959 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CDC42EP3Q9UKI2 254 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 NCKAP1Q9Y2A7 1128 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 TESMINQ9Y4I5 508 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 NOS1P29475 1434 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SVILO95425 2214 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 A0A0B4J293 547 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 TTC26A0AVF1 554 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ESPNB1AK53 854 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CFAP99D6REC4 459 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PRSS44E7EML9 344 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 TLR3O15455 904 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 PRMT3O60678 531 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 LILRB5O75023 590 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SOCS5O75159 536 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 GCATO75600 419 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PRAMEF12O95522 483 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 LMNAP02545 664 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 SLC3A2P08195 630 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 U2AF1L5P0DN76 240 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 ZBTB48P10074 688 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 KCNA5P22460 613 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 MSX1P28360 303 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CSF2RBP32927 897 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SOX5P35711 763 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SKOR1P84550 965 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 U2AF1Q01081 240 aaKnown RBP eCLIP1.64□□□□□ -2.15
XRN1-214ENST00000498077 ATP2B2Q01814 1243 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PTSQ03393 145 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 PRKCQQ04759 706 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 WASHC5Q12768 1159 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 INPP5AQ14642 412 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 NR6A1Q15406 480 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ARMCX4Q5H9R4 360 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ARTNQ5T4W7 220 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ALKBH2Q6NS38 261 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 DCLRE1AQ6PJP8 1040 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 KSR2Q6VAB6 950 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 TRIM46Q7Z4K8 759 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SGMS1Q86VZ5 419 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ERC1Q8IUD2 1116 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ZNF671Q8TAW3 534 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ADAMTS18Q8TE60 1221 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 RILPL2Q969X0 211 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ARMC5Q96C12 935 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SCLYQ96I15 445 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 WNK4Q96J92 1243 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 HARBI1Q96MB7 349 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 RBBP8Q99708 897 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 CRACR2AQ9BSW2 395 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SGPP1Q9BX95 441 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 ROPN1BQ9BZX4 212 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 IQCGQ9H095 443 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 ROPN1Q9HAT0 212 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 PLCB1Q9NQ66 1216 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SAMD15Q9P1V8 674 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 APEX2Q9UBZ4 518 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SCAF8Q9UPN6 1271 aaKnown RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 BCS1LQ9Y276 419 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 SPTBN4Q9H254 2564 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 COL2A1P02458 1487 aaPredicted RBP1.64□□□□□ -2.15
XRN1-214ENST00000498077 IRS2Q9Y4H2 1338 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 MYO9AB2RTY4 2548 aa1.64□□□□□ -2.15
XRN1-214ENST00000498077 A0A1W2PRU2 124 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 SERTM1A2A2V5 107 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 GLTPD2A6NH11 291 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 MINDY4BA8MYZ0 360 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 M0R2N6 131 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 TRDMT1O14717 391 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 APAF1O14727 1248 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 NBNO60934 754 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 CELA2BP08218 269 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 MMEP08473 750 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 IGFBP1P08833 259 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 CCDC192P0DO97 292 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 HK1P19367 917 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 LMOD1P29536 600 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 PRKAR2BP31323 418 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 TMED10P49755 219 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 CENPCQ03188 943 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 ADCY1Q08828 1119 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 STX4Q12846 297 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 ORC1Q13415 861 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 DOC2BQ14184 412 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 MXD4Q14582 209 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 TIGD6Q17RP2 521 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 TIGD5Q53EQ6 642 aa1.63□□□□□ -2.15
XRN1-214ENST00000498077 EAPPQ56P03 285 aaPredicted RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 ZC3H12AQ5D1E8 599 aaKnown RBP1.63□□□□□ -2.15
XRN1-214ENST00000498077 ATPAF1Q5TC12 328 aaPredicted RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms