RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 KRT76Q01546 638 aa19.77■□□□□ 0.75
CHRNA4-206ENST00000498043 Q3C1V9 767 aa19.77■□□□□ 0.75
CHRNA4-206ENST00000498043 IRF2BP1Q8IU81 584 aa19.77■□□□□ 0.75
CHRNA4-206ENST00000498043 CTAGE1Q96RT6 745 aa19.77■□□□□ 0.75
CHRNA4-206ENST00000498043 POLD4Q9HCU8 107 aa19.77■□□□□ 0.75
CHRNA4-206ENST00000498043 TAB2Q9NYJ8 693 aa19.77■□□□□ 0.75
CHRNA4-206ENST00000498043 PCDHA2Q9Y5H9 948 aa19.77■□□□□ 0.75
CHRNA4-206ENST00000498043 CCL15-CCL14A0A0B4J2E2 113 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 TBCAO75347 108 aaKnown RBP19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 SLC25A27O95847 323 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 KCNA2P16389 499 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 SPAG1Q07617 926 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 CCL15Q16663 113 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 GNPTABQ3T906 1256 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 WDR78Q5VTH9 848 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 CENPPQ6IPU0 288 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 SFR1Q86XK3 245 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 MYOCDQ8IZQ8 938 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 MS4A4AQ96JQ5 239 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 IWS1Q96ST2 819 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 THAP9Q9H5L6 903 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 ADD3Q9UEY8 706 aaKnown RBP19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 LIMA1Q9UHB6 759 aaKnown RBP19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 PNMA3Q9UL41 463 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 PYCARDQ9ULZ3 195 aa19.76■□□□□ 0.75
CHRNA4-206ENST00000498043 WDR64B1ANS9 1081 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 TEX33O43247 280 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 SORBS3O60504 671 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 STAM2O75886 525 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 CETPP11597 493 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 GTF2A2P52657 109 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 STXBP2Q15833 593 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 UGCGQ16739 394 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 ANKRD20A12PQ8NF67 263 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 SMCR8Q8TEV9 937 aaPredicted RBP19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 ZSWIM4Q9H7M6 989 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 SOWAHBA6NEL2 793 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 PDHXO00330 501 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 QARSP47897 775 aaKnown RBP19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 JAK3P52333 1124 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 GSDMDP57764 484 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 NR1I3Q14994 352 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 LRRC8AQ8IWT6 810 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 VPS16Q9H269 839 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 BCAS3Q9H6U6 928 aa19.75■□□□□ 0.75
CHRNA4-206ENST00000498043 ARHGEF35A5YM69 484 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 MAFGO15525 162 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 PGK2P07205 417 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 ERVK-9P63128 1117 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 ERVK-24P63145 666 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 SP4Q02446 784 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 C1orf186Q6ZWK4 172 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 NOC3LQ8WTT2 800 aaKnown RBP19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 BRI3BPQ8WY22 251 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 CDHR1Q96JP9 859 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 WDR81Q562E7 1941 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 BTBD19C9JJ37 291 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 SFNP31947 248 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 CASP5P51878 434 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 COPB1P53618 953 aaKnown RBP19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 FILIP1LQ4L180 1135 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 ARMCX5Q6P1M9 558 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 TRMT1LQ7Z2T5 733 aaKnown RBP19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 NELFCDQ8IXH7 590 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 C17orf53Q8N3J3 647 aaPredicted RBP19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 FAM133AQ8N9E0 248 aa19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 JPH1Q9HDC5 661 aaPredicted RBP19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 MAGEC2Q9UBF1 373 aaPredicted RBP19.74■□□□□ 0.75
CHRNA4-206ENST00000498043 EIF3JO75822 258 aaKnown RBP19.73■□□□□ 0.75
CHRNA4-206ENST00000498043 COPB2P35606 906 aa19.73■□□□□ 0.75
CHRNA4-206ENST00000498043 SPECC1LQ69YQ0 1117 aa19.73■□□□□ 0.75
CHRNA4-206ENST00000498043 ZNF746Q6NUN9 644 aaPredicted RBP19.73■□□□□ 0.75
CHRNA4-206ENST00000498043 SEPT14Q6ZU15 432 aa19.73■□□□□ 0.75
CHRNA4-206ENST00000498043 SCFD1Q8WVM8 642 aa19.73■□□□□ 0.75
CHRNA4-206ENST00000498043 MMP19Q99542 508 aa19.73■□□□□ 0.75
CHRNA4-206ENST00000498043 TELO2Q9Y4R8 837 aa19.73■□□□□ 0.75
CHRNA4-206ENST00000498043 TMEM150BA6NC51 233 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 SFI1A8K8P3 1242 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 SPATA31C2B4DYI2 1134 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 N4BP3O15049 544 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 EEF1GP26641 437 aaKnown RBP19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 LRRC63Q05C16 580 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 CCDC150Q8NCX0 1101 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 CNOT6LQ96LI5 555 aaKnown RBP19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 COL4A3BPQ9Y5P4 624 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 TRPM7Q96QT4 1865 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 NFASCO94856 1347 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 FAM13AO94988 1023 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 SFPQP23246 707 aaKnown RBP eCLIP19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 KCTD2Q14681 263 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 SPRYD7Q5W111 196 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 CST9Q5W186 159 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 TSG101Q99816 390 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 SH2D3AQ9BRG2 576 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 PORCNQ9H237 461 aa19.72■□□□□ 0.75
CHRNA4-206ENST00000498043 ZNF500O60304 480 aaPredicted RBP19.71■□□□□ 0.75
CHRNA4-206ENST00000498043 EDNRBP24530 442 aa19.71■□□□□ 0.75
CHRNA4-206ENST00000498043 YWHABP31946 246 aaKnown RBP19.71■□□□□ 0.75
CHRNA4-206ENST00000498043 PSMC5P62195 406 aa19.71■□□□□ 0.75
CHRNA4-206ENST00000498043 SP2Q02086 613 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms