RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 ABL1P00519 1130 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 STAT2P52630 851 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 LBX1P52954 281 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 RAD51AP2Q09MP3 1159 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 TBX2Q13207 712 aaPredicted RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 IFI16Q16666 785 aaKnown RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 GNASQ5JWF2 1037 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 CCDC170Q8IYT3 715 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 MRIQ9BWK5 157 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 SLITRK6Q9H5Y7 841 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 TLR3O15455 904 aaKnown RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 MAGEA1P43355 309 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 ARHGAP4P98171 946 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 NFIAQ12857 509 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 RRAGAQ7L523 313 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 PROM2Q8N271 834 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 SLC35F6Q8N357 371 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 ACRBPQ8NEB7 543 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 ANKRD7Q92527 254 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 RABGGTAQ92696 567 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 NDST4Q9H3R1 872 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 TAF1DQ9H5J8 278 aaPredicted RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 MANSC4A6NHS7 340 aaPredicted RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 FKTNO75072 461 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 SHMT1P34896 483 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 REXO1L1PQ8IX06 675 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 SECISBP2LQ93073 1101 aaKnown RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 OPTNQ96CV9 577 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 PRMT6Q96LA8 375 aaPredicted RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 FAM20AQ96MK3 541 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 GLT1D1Q96MS3 346 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 DDX4Q9NQI0 724 aaKnown RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 AKAP11Q9UKA4 1901 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 DYNC1LI2O43237 492 aaPredicted RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 GAS7O60861 476 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 FKBP1AP62942 108 aaKnown RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 SP3Q02447 781 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 STK4Q13043 487 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 LRRC41Q15345 812 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 APOBEC3HQ6NTF7 200 aaKnown RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 SRGAP1Q7Z6B7 1085 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 CDCA5Q96FF9 252 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 L2HGDHQ9H9P8 463 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 RAVER2Q9HCJ3 691 aaKnown RBP8.78□□□□□ -1
HLA-DMB-262ENST00000498020 COL4A3BPQ9Y5P4 624 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 SHANK3Q9BYB0 1731 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 TPRP12270 2363 aaKnown RBP8.77□□□□□ -1
HLA-DMB-262ENST00000498020 TTC26A0AVF1 554 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 EVI5O60447 810 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 EIF2AK2P19525 551 aaKnown RBP8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 FXR1P51114 621 aaKnown RBP eCLIP8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 FAM160B2Q86V87 743 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 SMAP1Q8IYB5 467 aaPredicted RBP8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 C4orf32Q8N8J7 132 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 MTUS1Q9ULD2 1270 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 FAM184BQ9ULE4 1060 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 DUOX1Q9NRD9 1551 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 MARK3P27448 753 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 ADAM9Q13443 819 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 PRPF4BQ13523 1007 aaKnown RBP8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 RAPGEF1Q13905 1077 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 ANKRD40Q6AI12 368 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 CERS5Q8N5B7 392 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 RPGRIP1Q96KN7 1286 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 IFIH1Q9BYX4 1025 aaKnown RBP8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 MRPL44Q9H9J2 332 aaKnown RBP8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 PRDM10Q9NQV6 1147 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 GOLGA6L10A0A0M3HER8 536 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 LRRC10BA6NIK2 292 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 STAMBPO95630 424 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 GYPCP04921 128 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 STAT3P40763 770 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 GABPAQ06546 454 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 SFMBT2Q5VUG0 894 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 RASGRP2Q7LDG7 609 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 HACE1Q8IYU2 909 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 HTATIP2Q9BUP3 242 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 METTL14Q9HCE5 456 aaKnown RBP8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 ARMCX3Q9UH62 379 aaPredicted RBP8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 CAPN11Q9UMQ6 739 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 SAR1BQ9Y6B6 198 aa8.77□□□□□ -1.01
HLA-DMB-262ENST00000498020 KLRG2A4D1S0 409 aaPredicted RBP8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 MYMKA6NI61 221 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 GCNT3O95395 438 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 NDUFB10O96000 172 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 KRT13P13646 458 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 MTF1Q14872 753 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 BRD3Q15059 726 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 IL17AQ16552 155 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 PPP4R3CPQ6ZMV5 832 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 ERO1BQ86YB8 467 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 FMNL3Q8IVF7 1028 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 TPH2Q8IWU9 490 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 TRIM58Q8NG06 486 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 HINFPQ9BQA5 517 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 IDI2Q9BXS1 227 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 EMILIN3Q9NT22 766 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 INTS13Q9NVM9 706 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 GPRC5DQ9NZD1 345 aa8.76□□□□□ -1.01
HLA-DMB-262ENST00000498020 PNMA2Q9UL42 364 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms