RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 DNAJA1P31689 397 aaKnown RBP6.39□□□□□ -1.39
SMC4-227ENST00000497984 KLF10Q13118 480 aa6.39□□□□□ -1.39
SMC4-227ENST00000497984 TOP3AQ13472 1001 aaPredicted RBP6.39□□□□□ -1.39
SMC4-227ENST00000497984 IFNL2Q8IZJ0 200 aa6.39□□□□□ -1.39
SMC4-227ENST00000497984 NEIL1Q96FI4 390 aaPredicted RBP6.39□□□□□ -1.39
SMC4-227ENST00000497984 GMLQ99445 158 aa6.39□□□□□ -1.39
SMC4-227ENST00000497984 MENTQ9BUN1 341 aa6.39□□□□□ -1.39
SMC4-227ENST00000497984 SLC39A2Q9NP94 309 aa6.39□□□□□ -1.39
SMC4-227ENST00000497984 HS3ST3A1Q9Y663 406 aa6.39□□□□□ -1.39
SMC4-227ENST00000497984 TRAV20A0A0B4J274 112 aa6.38□□□□□ -1.39
SMC4-227ENST00000497984 POLD1P28340 1107 aa6.38□□□□□ -1.39
SMC4-227ENST00000497984 DBPQ10586 325 aaPredicted RBP6.38□□□□□ -1.39
SMC4-227ENST00000497984 IFRD2Q12894 506 aaPredicted RBP6.38□□□□□ -1.39
SMC4-227ENST00000497984 HS1BP3Q53T59 392 aa6.38□□□□□ -1.39
SMC4-227ENST00000497984 TAX1BP1Q86VP1 789 aa6.38□□□□□ -1.39
SMC4-227ENST00000497984 GIMAP8Q8ND71 665 aaPredicted RBP6.38□□□□□ -1.39
SMC4-227ENST00000497984 CARD11Q9BXL7 1154 aa6.38□□□□□ -1.39
SMC4-227ENST00000497984 ING1Q9UK53 422 aaPredicted RBP6.38□□□□□ -1.39
SMC4-227ENST00000497984 OVOL3O00110 214 aa6.37□□□□□ -1.39
SMC4-227ENST00000497984 PRKD1Q15139 912 aaPredicted RBP6.37□□□□□ -1.39
SMC4-227ENST00000497984 FUKQ8N0W3 1084 aa6.37□□□□□ -1.39
SMC4-227ENST00000497984 SLC43A3Q8NBI5 491 aa6.37□□□□□ -1.39
SMC4-227ENST00000497984 ADOQ96SZ5 270 aa6.37□□□□□ -1.39
SMC4-227ENST00000497984 SLITRK6Q9H5Y7 841 aa6.37□□□□□ -1.39
SMC4-227ENST00000497984 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.36□□□□□ -1.39
SMC4-227ENST00000497984 FAM90A27PA6NNH2 459 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 WNT9AO14904 365 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 CUTAO60888 179 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 FOXE3Q13461 319 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 RNF151Q2KHN1 245 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 MIIPQ5JXC2 388 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 AGBL4Q5VU57 503 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 RNF207Q6ZRF8 634 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 Q6ZSN1 163 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 LRRC47Q8N1G4 583 aaKnown RBP6.36□□□□□ -1.39
SMC4-227ENST00000497984 EDAQ92838 391 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 ALG1Q9BT22 464 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 SRPK3Q9UPE1 567 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 TRAF6Q9Y4K3 522 aa6.36□□□□□ -1.39
SMC4-227ENST00000497984 ESYT3A0FGR9 886 aa6.35□□□□□ -1.39
SMC4-227ENST00000497984 PTPN1P18031 435 aaKnown RBP6.35□□□□□ -1.39
SMC4-227ENST00000497984 COMTP21964 271 aa6.35□□□□□ -1.39
SMC4-227ENST00000497984 RAC3P60763 192 aa6.35□□□□□ -1.39
SMC4-227ENST00000497984 RAB33AQ14088 237 aa6.35□□□□□ -1.39
SMC4-227ENST00000497984 BTBD8Q5XKL5 378 aa6.35□□□□□ -1.39
SMC4-227ENST00000497984 ZNF503Q96F45 646 aa6.35□□□□□ -1.39
SMC4-227ENST00000497984 NPIPB8E9PQR5 432 aa6.34□□□□□ -1.39
SMC4-227ENST00000497984 PLSCR1O15162 318 aa6.34□□□□□ -1.39
SMC4-227ENST00000497984 RAD17O75943 681 aa6.34□□□□□ -1.39
SMC4-227ENST00000497984 AMY2AP04746 511 aa6.34□□□□□ -1.39
SMC4-227ENST00000497984 AMY2BP19961 511 aa6.34□□□□□ -1.39
SMC4-227ENST00000497984 ETV4P43268 484 aa6.34□□□□□ -1.39
SMC4-227ENST00000497984 DUSP8Q13202 625 aa6.34□□□□□ -1.39
SMC4-227ENST00000497984 IGFL4Q6B9Z1 124 aa6.34□□□□□ -1.39
SMC4-227ENST00000497984 DPH6Q7L8W6 267 aa6.34□□□□□ -1.39
SMC4-227ENST00000497984 ZNF669Q96BR6 464 aaPredicted RBP6.34□□□□□ -1.39
SMC4-227ENST00000497984 OAZ3Q9UMX2 235 aa6.34□□□□□ -1.39
SMC4-227ENST00000497984 SLC30A1Q9Y6M5 507 aa6.34□□□□□ -1.39
SMC4-227ENST00000497984 MATN2O00339 956 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 MAN2B1O00754 1011 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 ADCY3O60266 1144 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 CR2P20023 1033 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 NOLC1Q14978 699 aaKnown RBP eCLIP6.33□□□□□ -1.44e-16■■■■■ 30.2
SMC4-227ENST00000497984 GPR19Q15760 415 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 ZNF568Q3ZCX4 644 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 ZMAT1Q5H9K5 638 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 CRB2Q5IJ48 1285 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 ARHGAP36Q6ZRI8 547 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 NLGN4XQ8N0W4 816 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 DPYSL5Q9BPU6 564 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 ZNF341Q9BYN7 854 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 ZDHHC5Q9C0B5 715 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 RIC8BQ9NVN3 520 aa6.33□□□□□ -1.4
SMC4-227ENST00000497984 RRADP55042 308 aa6.32□□□□□ -1.4
SMC4-227ENST00000497984 IL13RA1P78552 427 aa6.32□□□□□ -1.4
SMC4-227ENST00000497984 PAK1Q13153 545 aa6.32□□□□□ -1.4
SMC4-227ENST00000497984 TBR1Q16650 682 aa6.32□□□□□ -1.4
SMC4-227ENST00000497984 NRN1LQ496H8 165 aa6.32□□□□□ -1.4
SMC4-227ENST00000497984 USP39Q53GS9 565 aaKnown RBP6.32□□□□□ -1.4
SMC4-227ENST00000497984 DPP8Q6V1X1 898 aaPredicted RBP6.32□□□□□ -1.4
SMC4-227ENST00000497984 SPATC1Q76KD6 591 aa6.32□□□□□ -1.4
SMC4-227ENST00000497984 MAMDC2Q7Z304 686 aaPredicted RBP6.32□□□□□ -1.4
SMC4-227ENST00000497984 PCDH19Q8TAB3 1148 aa6.32□□□□□ -1.4
SMC4-227ENST00000497984 SCYL1Q96KG9 808 aa6.32□□□□□ -1.4
SMC4-227ENST00000497984 SPATA9Q9BWV2 254 aa6.32□□□□□ -1.4
SMC4-227ENST00000497984 MSRB2Q9Y3D2 182 aa6.32□□□□□ -1.4
SMC4-227ENST00000497984 AQP7O14520 342 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 C6orf222P0C671 652 aaPredicted RBP6.31□□□□□ -1.4
SMC4-227ENST00000497984 ACO1P21399 889 aaKnown RBP6.31□□□□□ -1.4
SMC4-227ENST00000497984 PTGS1P23219 599 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 NFYCQ13952 458 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 WDR72Q3MJ13 1102 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 FIGNQ5HY92 759 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 MAMDC4Q6UXC1 1216 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 LARP4Q71RC2 724 aaKnown RBP eCLIP6.31□□□□□ -1.44e-12■■■■□ 24.2
SMC4-227ENST00000497984 POLNQ7Z5Q5 900 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 OSTM1Q86WC4 334 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 EXTL1Q92935 676 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 FBXW5Q969U6 566 aa6.31□□□□□ -1.4
SMC4-227ENST00000497984 BTBD7Q9P203 1132 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms