RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	TEX13B	Q9BXU2	312 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	UBE2O	Q9C0C9	1292 aa	Known RBP	6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	SH2D4A	Q9H788	454 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	RAVER2	Q9HCJ3	691 aa	Known RBP	6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	A1CF	Q9NQ94	594 aa	Known RBP	6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	ZFAT	Q9P243	1243 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	CLIP2	Q9UDT6	1046 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	SEPT3	Q9UH03	358 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	ANAPC4	Q9UJX5	808 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	IVNS1ABP	Q9Y6Y0	642 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	TET1	Q8NFU7	2136 aa		6.55	□□□□□ -1.36
UBE3C-208	ENST00000497368	SYNGAP1	Q96PV0	1343 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368		A0A1W2PQ45	241 aa	Predicted RBP	6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368		A0A1W2PQY0	241 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368		M0R082	166 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	ORC4	O43929	436 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	MSC	O60682	206 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	ALB	P02768	609 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	FCER1A	P12319	257 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	CNGA1	P29973	690 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	ADCYAP1R1	P41586	468 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	NKX3-2	P78367	333 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	TFAP4	Q01664	338 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	CNTN2	Q02246	1040 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	SLC35G1	Q2M3R5	365 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	SLFN13	Q68D06	897 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	TTBK2	Q6IQ55	1244 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	CMTR1	Q8N1G2	835 aa	Known RBP	6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	ZNF417	Q8TAU3	575 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	FERMT2	Q96AC1	680 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	CHMP4C	Q96CF2	233 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	ZNF587	Q96SQ5	575 aa	Predicted RBP	6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	UPF3A	Q9H1J1	476 aa	Known RBP	6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	CHMP4B	Q9H444	224 aa	Known RBP	6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	MTMR10	Q9NXD2	777 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	TBX21	Q9UL17	535 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	SYNPO2	Q9UMS6	1093 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	ATP11B	Q9Y2G3	1177 aa		6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	DIS3	Q9Y2L1	958 aa	Known RBP	6.54	□□□□□ -1.36
UBE3C-208	ENST00000497368	GRIN2D	O15399	1336 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	MYH7B	A7E2Y1	1941 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	SASH3	O75995	380 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	TTLL1	O95922	423 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	SNHG28	P0DPA3	235 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	BMP3	P12645	472 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	GSPT1	P15170	499 aa	Known RBP	6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	GNAT2	P19087	354 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	BRD2	P25440	801 aa	Known RBP	6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	TARS	P26639	723 aa	Known RBP	6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	CST5	P28325	142 aa	Predicted RBP	6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	TLE2	Q04725	743 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	COL9A3	Q14050	684 aa	Predicted RBP	6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	SHH	Q15465	462 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	ALX1	Q15699	326 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	FAM109B	Q6ICB4	259 aa	Predicted RBP	6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	KCTD1	Q719H9	257 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	ARMCX2	Q7L311	632 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	CPXCR1	Q8N123	301 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	EXOC6	Q8TAG9	804 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	MORC4	Q8TE76	937 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	TRIM11	Q96F44	468 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	GPATCH3	Q96I76	525 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	LNPK	Q9C0E8	428 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	NAPB	Q9H115	298 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	RANBP17	Q9H2T7	1088 aa	Known RBP	6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	TTYH1	Q9H313	450 aa	Predicted RBP	6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	MKNK2	Q9HBH9	465 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	CWC22	Q9HCG8	908 aa	Known RBP	6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	XPNPEP3	Q9NQH7	507 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	DNAJB12	Q9NXW2	375 aa	Known RBP	6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	NRBP1	Q9UHY1	535 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	SLC6A14	Q9UN76	642 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	TAF6L	Q9Y6J9	622 aa		6.53	□□□□□ -1.36
UBE3C-208	ENST00000497368	UMODL1	Q5DID0	1318 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	CCDC171	Q6TFL3	1326 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	TRIP12	Q14669	1992 aa	Predicted RBP	6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	KRBA1	A5PL33	1030 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	TMEM232	C9JQI7	657 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	NFIB	O00712	420 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	KIAA0355	O15063	1070 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	PLA2G6	O60733	806 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	FGA	P02671	866 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	ITGB2	P05107	769 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	HSPD1	P10809	573 aa	Known RBP	6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	AKR1A1	P14550	325 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	MCC	P23508	829 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	CDK7	P50613	346 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	ACLY	P53396	1101 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	OAZ1	P54368	228 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	HAND2	P61296	217 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	FAAP100	Q0VG06	881 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	KCTD2	Q14681	263 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	PLA2G4E	Q3MJ16	856 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	ANKRD45	Q5TZF3	282 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	TAPT1	Q6NXT6	567 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	BTNL9	Q6UXG8	535 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	SLC30A10	Q6XR72	485 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	C16orf59	Q7L2K0	433 aa		6.52	□□□□□ -1.37
UBE3C-208	ENST00000497368	CCAR1	Q8IX12	1150 aa	Known RBP	6.52	□□□□□ -1.37

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