RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 RNF41Q9H4P4 317 aaPredicted RBP5.56□□□□□ -1.52
CMSS1-209ENST00000497345 CNNM2Q9H8M5 875 aa5.56□□□□□ -1.52
CMSS1-209ENST00000497345 DDX4Q9NQI0 724 aaKnown RBP5.56□□□□□ -1.52
CMSS1-209ENST00000497345 C1GALT1Q9NS00 363 aa5.56□□□□□ -1.52
CMSS1-209ENST00000497345 ARPP21Q9UBL0 812 aaPredicted RBP5.56□□□□□ -1.52
CMSS1-209ENST00000497345 HDAC9Q9UKV0 1011 aa5.56□□□□□ -1.52
CMSS1-209ENST00000497345 PPP1R9AQ9ULJ8 1098 aa5.56□□□□□ -1.52
CMSS1-209ENST00000497345 ISY1Q9ULR0 285 aaKnown RBP5.56□□□□□ -1.52
CMSS1-209ENST00000497345 GAKO14976 1311 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 ZNF541Q9H0D2 1346 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 ERICH2A1L162 156 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 GOLGA8AA7E2F4 631 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 SH2B2O14492 632 aaPredicted RBP5.55□□□□□ -1.52
CMSS1-209ENST00000497345 CPLX1O14810 134 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 WDHD1O75717 1129 aaPredicted RBP5.55□□□□□ -1.52
CMSS1-209ENST00000497345 VIL1P09327 827 aaKnown RBP5.55□□□□□ -1.52
CMSS1-209ENST00000497345 YBX3P16989 372 aaKnown RBP eCLIP5.55□□□□□ -1.523e-9■■■□□ 15.9
CMSS1-209ENST00000497345 PDIA3P30101 505 aaKnown RBP5.55□□□□□ -1.52
CMSS1-209ENST00000497345 CDK8P49336 464 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 ZNF157P51786 506 aaPredicted RBP5.55□□□□□ -1.52
CMSS1-209ENST00000497345 GUCY1B3Q02153 619 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 PDE4BQ07343 736 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 CUL4AQ13619 759 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 TBC1D10BQ4KMP7 808 aaPredicted RBP5.55□□□□□ -1.52
CMSS1-209ENST00000497345 C12orf60Q5U649 245 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 HHIPL2Q6UWX4 724 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 SYNE3Q6ZMZ3 975 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 ZNF765Q7L2R6 523 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 VSIG10LQ86VR7 867 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 TP53INP2Q8IXH6 220 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 CRACR2BQ8N4Y2 399 aaPredicted RBP5.55□□□□□ -1.52
CMSS1-209ENST00000497345 FAM184AQ8NB25 1140 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 GLIS3Q8NEA6 775 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 ZDHHC15Q96MV8 337 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 CSRNP1Q96S65 589 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 LY9Q9HBG7 655 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 TMOD2Q9NZR1 351 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 RNF181Q9P0P0 153 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 ZC3H7BQ9UGR2 993 aaKnown RBP5.55□□□□□ -1.52
CMSS1-209ENST00000497345 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.55□□□□□ -1.52
CMSS1-209ENST00000497345 SLC12A7Q9Y666 1083 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 NAV1Q8NEY1 1877 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 SNED1Q8TER0 1413 aa5.55□□□□□ -1.52
CMSS1-209ENST00000497345 ASTN2O75129 1339 aaPredicted RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 TNKSO95271 1327 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 hCG_1642624A0A1W2PR95 340 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 PTPDC1A2A3K4 754 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 DDTLA6NHG4 134 aaPredicted RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 DYNC1LI2O43237 492 aaPredicted RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 ZBTB43O43298 467 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 PFKFB2O60825 505 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 HLA-DOAP06340 250 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 TSPY3P0CV98 308 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 TSPY8P0CW00 308 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 LIG1P18858 919 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 NCLP19338 710 aaKnown RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 METAP2P50579 478 aaKnown RBP eCLIP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 PDE4CQ08493 712 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 FAAP100Q0VG06 881 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 GRM2Q14416 872 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 SART3Q15020 963 aaKnown RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 TNIP1Q15025 636 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 SHROOM1Q2M3G4 852 aaPredicted RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 NBPF9Q3BBW0 867 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 SBK1Q52WX2 424 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 IFIT1BQ5T764 474 aaKnown RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 LARP1BQ659C4 914 aaKnown RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 OTUD7BQ6GQQ9 843 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 GIMAP6Q6P9H5 292 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 OGFOD3Q6PK18 319 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 TTC6Q86TZ1 520 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 FERMT3Q86UX7 667 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 IGDCC4Q8TDY8 1250 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 TNPO1Q92973 898 aaKnown RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 GTF3C6Q969F1 213 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 WDR89Q96FK6 387 aaPredicted RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 TMEM87BQ96K49 555 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 DMRTB1Q96MA1 342 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 OSBPL5Q9H0X9 879 aaPredicted RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 CWC22Q9HCG8 908 aaKnown RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 LRRC4CQ9HCJ2 640 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 ZNF70Q9UC06 446 aaPredicted RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 CNOT7Q9UIV1 285 aaKnown RBP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 ANAPC4Q9UJX5 808 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.54□□□□□ -1.52
CMSS1-209ENST00000497345 SUGT1Q9Y2Z0 365 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 ZDHHC9Q9Y397 364 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 MYH1P12882 1939 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 CDK5RAP2Q96SN8 1893 aa5.54□□□□□ -1.52
CMSS1-209ENST00000497345 ZMYM6O95789 1325 aa5.53□□□□□ -1.52
CMSS1-209ENST00000497345 UBE2Q2LH0YL09 131 aa5.53□□□□□ -1.52
CMSS1-209ENST00000497345 H3BQV1 296 aa5.53□□□□□ -1.52
CMSS1-209ENST00000497345 TMPRSS2O15393 492 aa5.53□□□□□ -1.52
CMSS1-209ENST00000497345 ORC4O43929 436 aa5.53□□□□□ -1.52
CMSS1-209ENST00000497345 CTDNEP1O95476 244 aa5.53□□□□□ -1.52
CMSS1-209ENST00000497345 SLFN14P0C7P3 912 aa5.53□□□□□ -1.52
CMSS1-209ENST00000497345 AKR1B1P15121 316 aa5.53□□□□□ -1.52
CMSS1-209ENST00000497345 SYT1P21579 422 aa5.53□□□□□ -1.52
CMSS1-209ENST00000497345 DDIT3P35638 169 aa5.53□□□□□ -1.52
CMSS1-209ENST00000497345 FKBP1AP62942 108 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms