RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 TMEM132BQ14DG7 1078 aa6.66□□□□□ -1.34
VPS36-206ENST00000497149 ATP13A4Q4VNC1 1196 aa6.66□□□□□ -1.34
VPS36-206ENST00000497149 RNF219Q5W0B1 726 aaPredicted RBP6.66□□□□□ -1.34
VPS36-206ENST00000497149 C11orf74Q86VG3 221 aa6.66□□□□□ -1.34
VPS36-206ENST00000497149 SCYL1Q96KG9 808 aa6.66□□□□□ -1.34
VPS36-206ENST00000497149 ELF4Q99607 663 aaPredicted RBP6.66□□□□□ -1.34
VPS36-206ENST00000497149 RNF38Q9H0F5 515 aa6.66□□□□□ -1.34
VPS36-206ENST00000497149 ACSS2Q9NR19 701 aa6.66□□□□□ -1.34
VPS36-206ENST00000497149 MBD1Q9UIS9 605 aaPredicted RBP6.66□□□□□ -1.34
VPS36-206ENST00000497149 PCDHA5Q9Y5H7 936 aa6.66□□□□□ -1.34
VPS36-206ENST00000497149 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.65□□□□□ -1.34
VPS36-206ENST00000497149 TGM5O43548 720 aa6.65□□□□□ -1.34
VPS36-206ENST00000497149 CYP17A1P05093 508 aa6.65□□□□□ -1.34
VPS36-206ENST00000497149 SDHAP31040 664 aa6.65□□□□□ -1.34
VPS36-206ENST00000497149 STAT5AP42229 794 aa6.65□□□□□ -1.34
VPS36-206ENST00000497149 CACNB2Q08289 660 aaPredicted RBP6.65□□□□□ -1.34
VPS36-206ENST00000497149 TARBP2Q15633 366 aaKnown RBP6.65□□□□□ -1.34
VPS36-206ENST00000497149 CR1LQ2VPA4 569 aa6.65□□□□□ -1.34
VPS36-206ENST00000497149 TEPPQ6URK8 271 aa6.65□□□□□ -1.34
VPS36-206ENST00000497149 FAM26EQ8N5C1 309 aa6.65□□□□□ -1.34
VPS36-206ENST00000497149 PCIF1Q9H4Z3 704 aa6.65□□□□□ -1.34
VPS36-206ENST00000497149 NGRNQ9NPE2 291 aaKnown RBP6.65□□□□□ -1.34
VPS36-206ENST00000497149 APOBEC2Q9Y235 224 aaKnown RBP6.65□□□□□ -1.34
VPS36-206ENST00000497149 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 PRAMEF25A6NGN4 478 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 ATF2P15336 505 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 CDR1P51861 262 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 NCKAP1LP55160 1127 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 HERVK_113P62684 666 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 NKX3-2P78367 333 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 SMAD3P84022 425 aaKnown RBP6.64□□□□□ -1.35
VPS36-206ENST00000497149 SMAD2Q15796 467 aaKnown RBP6.64□□□□□ -1.35
VPS36-206ENST00000497149 CATSPEREQ5SY80 951 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 CD300LDQ6UXZ3 194 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 PASD1Q8IV76 773 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 FBXO15Q8NCQ5 510 aaPredicted RBP6.64□□□□□ -1.35
VPS36-206ENST00000497149 MZB1Q8WU39 189 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 DDX11Q96FC9 970 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 SGPP1Q9BX95 441 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 TOMM22Q9NS69 142 aa6.64□□□□□ -1.35
VPS36-206ENST00000497149 RASSF10A6NK89 507 aa6.63□□□□□ -1.35
VPS36-206ENST00000497149 ALG1L2C9J202 215 aa6.63□□□□□ -1.35
VPS36-206ENST00000497149 FOXP2O15409 715 aa6.63□□□□□ -1.35
VPS36-206ENST00000497149 SEMA7AO75326 666 aa6.63□□□□□ -1.35
VPS36-206ENST00000497149 PTX3P26022 381 aaPredicted RBP6.63□□□□□ -1.35
VPS36-206ENST00000497149 TMPRSS15P98073 1019 aa6.63□□□□□ -1.35
VPS36-206ENST00000497149 DBPQ10586 325 aaPredicted RBP6.63□□□□□ -1.35
VPS36-206ENST00000497149 ZC3H18Q86VM9 953 aaKnown RBP6.63□□□□□ -1.35
VPS36-206ENST00000497149 SPATS2Q86XZ4 545 aaKnown RBP6.63□□□□□ -1.35
VPS36-206ENST00000497149 POU5F2Q8N7G0 328 aa6.63□□□□□ -1.35
VPS36-206ENST00000497149 KCNN1Q92952 543 aa6.63□□□□□ -1.35
VPS36-206ENST00000497149 GCM1Q9NP62 436 aa6.63□□□□□ -1.35
VPS36-206ENST00000497149 HOMER2Q9NSB8 354 aa6.63□□□□□ -1.35
VPS36-206ENST00000497149 SLC5A4Q9NY91 659 aa6.63□□□□□ -1.35
VPS36-206ENST00000497149 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.62□□□□□ -1.35
VPS36-206ENST00000497149 N4BP3O15049 544 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 C8BP07358 591 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 MMEP08473 750 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 PFKLP17858 780 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 MC3RP41968 323 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 FNTBP49356 437 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 GUCY2FP51841 1108 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 PHC1P78364 1004 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 BROXQ5VW32 411 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 CD276Q5ZPR3 534 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 NECAB2Q7Z6G3 386 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 PROSER1Q86XN7 944 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 IGDCC3Q8IVU1 814 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 ASB15Q8WXK1 588 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 SLC5A5Q92911 643 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 C16orf92Q96LL3 132 aa6.62□□□□□ -1.35
VPS36-206ENST00000497149 DDX56Q9NY93 547 aaKnown RBP6.62□□□□□ -1.35
VPS36-206ENST00000497149 WASHC2CQ9Y4E1 1318 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 ULK1O75385 1050 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 ENO2P09104 434 aaPredicted RBP6.61□□□□□ -1.35
VPS36-206ENST00000497149 IGFBP6P24592 240 aaPredicted RBP6.61□□□□□ -1.35
VPS36-206ENST00000497149 EPHB3P54753 998 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 DLG4P78352 724 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 FAM50AQ14320 339 aaKnown RBP6.61□□□□□ -1.35
VPS36-206ENST00000497149 LRRC32Q14392 662 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 TERF2Q15554 542 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 DDB1Q16531 1140 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 GPR158Q5T848 1215 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 B3GNT8Q7Z7M8 397 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 STAG1Q8WVM7 1258 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 GBP4Q96PP9 640 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 ZMAT4Q9H898 229 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 BTBD7Q9P203 1132 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 RBPJLQ9UBG7 517 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 WASF3Q9UPY6 502 aa6.61□□□□□ -1.35
VPS36-206ENST00000497149 GOLGA6L22H0YM25 854 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 CYP2C8P10632 490 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 AOAHP28039 575 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 LSP1P33241 339 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 SESN3P58005 492 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 PFKPQ01813 784 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 MESP2Q0VG99 397 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 FAPQ12884 760 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 EPHA7Q15375 998 aa6.6□□□□□ -1.35
VPS36-206ENST00000497149 IQSEC1Q6DN90 963 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms