RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 SPIRE2Q8WWL2 714 aa8.96□□□□□ -0.98
SRRM1-220ENST00000496882 TNPO1Q92973 898 aaKnown RBP8.96□□□□□ -0.98
SRRM1-220ENST00000496882 GPR20Q99678 358 aa8.96□□□□□ -0.98
SRRM1-220ENST00000496882 SDF4Q9BRK5 362 aa8.96□□□□□ -0.98
SRRM1-220ENST00000496882 C16orf70Q9BSU1 422 aa8.96□□□□□ -0.98
SRRM1-220ENST00000496882 PRDM12Q9H4Q4 367 aa8.96□□□□□ -0.98
SRRM1-220ENST00000496882 RIC8AQ9NPQ8 531 aa8.96□□□□□ -0.98
SRRM1-220ENST00000496882 TCEAL9Q9UHQ7 104 aa8.96□□□□□ -0.98
SRRM1-220ENST00000496882 V9GY48 417 aaPredicted RBP8.96□□□□□ -0.98
SRRM1-220ENST00000496882 ABHD14A-ACY1A0A1B0GW23 586 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 SMCO2A6NFE2 343 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 RSPH10B2B2RC85 870 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 TLL1O43897 1013 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 CAND2O75155 1236 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 RSPH10BP0C881 870 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 HSPA4P34932 840 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 TCF7P36402 384 aaPredicted RBP8.95□□□□□ -0.98
SRRM1-220ENST00000496882 ARHGAP4P98171 946 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 APOBRQ0VD83 1088 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 AP3B2Q13367 1082 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 ZNF618Q5T7W0 954 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 RSPH3Q86UC2 560 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 HERC6Q8IVU3 1022 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 PPM1EQ8WY54 764 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 SEPT1Q8WYJ6 367 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 DHX38Q92620 1227 aaKnown RBP8.95□□□□□ -0.98
SRRM1-220ENST00000496882 GLG1Q92896 1179 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 KHSRPQ92945 711 aaKnown RBP eCLIP8.95□□□□□ -0.984e-8■□□□□ 8.4
SRRM1-220ENST00000496882 BRF1Q92994 677 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 ANO3Q9BYT9 981 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 AZI2Q9H6S1 392 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 ZSWIM6Q9HCJ5 1215 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 JADE2Q9NQC1 790 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 BARHL2Q9NY43 387 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 PKD2L1Q9P0L9 805 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 LIMD1Q9UGP4 676 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 BRPF3Q9ULD4 1205 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 YBX2Q9Y2T7 364 aaKnown RBP8.95□□□□□ -0.98
SRRM1-220ENST00000496882 TANC1Q9C0D5 1861 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 MYH7BA7E2Y1 1941 aa8.95□□□□□ -0.98
SRRM1-220ENST00000496882 STXBP3O00186 592 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 EPB41L2O43491 1005 aaKnown RBP8.94□□□□□ -0.98
SRRM1-220ENST00000496882 LGR5O75473 907 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 CXCL10P02778 98 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 RPLP2P05387 115 aaKnown RBP8.94□□□□□ -0.98
SRRM1-220ENST00000496882 CA3P07451 260 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 CD46P15529 392 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 RPS6KB1P23443 525 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 GNA11P29992 359 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 WDR5P61964 334 aaKnown RBP8.94□□□□□ -0.98
SRRM1-220ENST00000496882 ZNF200P98182 395 aaPredicted RBP8.94□□□□□ -0.98
SRRM1-220ENST00000496882 SEMA3FQ13275 785 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 COL9A3Q14050 684 aaPredicted RBP8.94□□□□□ -0.98
SRRM1-220ENST00000496882 TUSC1Q2TAM9 212 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 SERINC5Q86VE9 423 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 TRIM50Q86XT4 487 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 CCDC148Q8NFR7 591 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 BICD2Q8TD16 824 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 MXRA8Q9BRK3 442 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 RNPEPQ9H4A4 650 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 SMARCAD1Q9H4L7 1026 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 C6orf50Q9HD87 102 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 JPH1Q9HDC5 661 aaPredicted RBP8.94□□□□□ -0.98
SRRM1-220ENST00000496882 SETD4Q9NVD3 440 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 ERAP1Q9NZ08 941 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 SLC9A2Q9UBY0 812 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 SNX14Q9Y5W7 946 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 UBIAD1Q9Y5Z9 338 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 NRCAMQ92823 1304 aa8.94□□□□□ -0.98
SRRM1-220ENST00000496882 LAMA2P24043 3122 aaKnown RBP8.94□□□□□ -0.98
SRRM1-220ENST00000496882 TREHO43280 583 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 NBNO60934 754 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 AMHP03971 560 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 CTSHP09668 335 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 SCG2P13521 617 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 CPA1P15085 419 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 MYOGP15173 224 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 KCNA2P16389 499 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 ITGB5P18084 799 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 MARK3P27448 753 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 CDC27P30260 824 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 ADD1P35611 737 aaKnown RBP8.93□□□□□ -0.98
SRRM1-220ENST00000496882 PPFIA1Q13136 1202 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 PFKFB3Q16875 520 aaPredicted RBP8.93□□□□□ -0.98
SRRM1-220ENST00000496882 TRIM71Q2Q1W2 868 aaKnown RBP8.93□□□□□ -0.98
SRRM1-220ENST00000496882 CEP55Q53EZ4 464 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 TAF2Q6P1X5 1199 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 CPLX2Q6PUV4 134 aaKnown RBP8.93□□□□□ -0.98
SRRM1-220ENST00000496882 TRIM22Q8IYM9 498 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 MICALL1Q8N3F8 863 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 SEPT8Q92599 483 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 SYMPKQ92797 1274 aaKnown RBP8.93□□□□□ -0.98
SRRM1-220ENST00000496882 KCNB2Q92953 911 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 PGBD1Q96JS3 809 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 CTAGE1Q96RT6 745 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 BCAS3Q9H6U6 928 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 KCNH7Q9NS40 1196 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 CYP46A1Q9Y6A2 500 aa8.93□□□□□ -0.98
SRRM1-220ENST00000496882 SCN5AQ14524 2016 aa8.92□□□□□ -0.98
SRRM1-220ENST00000496882 NFASCO94856 1347 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms