RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 POLR2MP0CAP2 368 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 HAND2P61296 217 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 PPFIA1Q13136 1202 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 DUSP6Q16828 381 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 RBM23Q86U06 439 aaKnown RBP11.2□□□□□ -0.62
SH3D21-204ENST00000496636 TRIM50Q86XT4 487 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 MICAL1Q8TDZ2 1067 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 RNF216Q9NWF9 866 aaPredicted RBP11.2□□□□□ -0.62
SH3D21-204ENST00000496636 TUBE1Q9UJT0 475 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 SORCS3Q9UPU3 1222 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 PCDHB12Q9Y5F1 795 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 PCDHA1Q9Y5I3 950 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 PLXNA3P51805 1871 aa11.2□□□□□ -0.62
SH3D21-204ENST00000496636 FRMPD4Q14CM0 1322 aa11.19□□□□□ -0.62
SH3D21-204ENST00000496636 RBAK-RBAKDNI3L0D1 243 aa11.19□□□□□ -0.62
SH3D21-204ENST00000496636 PDGFBP01127 241 aaPredicted RBP11.19□□□□□ -0.62
SH3D21-204ENST00000496636 HOXB8P17481 243 aaPredicted RBP11.19□□□□□ -0.62
SH3D21-204ENST00000496636 HOXA13P31271 388 aaPredicted RBP11.19□□□□□ -0.62
SH3D21-204ENST00000496636 MFAP1P55081 439 aaKnown RBP11.19□□□□□ -0.62
SH3D21-204ENST00000496636 MRPS6P82932 125 aaKnown RBP11.19□□□□□ -0.62
SH3D21-204ENST00000496636 TMEM184AQ6ZMB5 413 aa11.19□□□□□ -0.62
SH3D21-204ENST00000496636 CYFIP1Q7L576 1253 aa11.19□□□□□ -0.62
SH3D21-204ENST00000496636 GIMAP8Q8ND71 665 aaPredicted RBP11.19□□□□□ -0.62
SH3D21-204ENST00000496636 RASGRP4Q8TDF6 673 aa11.19□□□□□ -0.62
SH3D21-204ENST00000496636 LINC01599Q8WXQ3 324 aa11.19□□□□□ -0.62
SH3D21-204ENST00000496636 GPKOWQ92917 476 aaPredicted RBP eCLIP11.19□□□□□ -0.62
SH3D21-204ENST00000496636 NECTIN4Q96NY8 510 aa11.19□□□□□ -0.62
SH3D21-204ENST00000496636 SENP7Q9BQF6 1050 aa11.19□□□□□ -0.62
SH3D21-204ENST00000496636 ZKSCAN3Q9BRR0 538 aa11.19□□□□□ -0.62
SH3D21-204ENST00000496636 VAT1LQ9HCJ6 419 aa11.19□□□□□ -0.62
SH3D21-204ENST00000496636 TPRP12270 2363 aaKnown RBP11.19□□□□□ -0.62
SH3D21-204ENST00000496636 A0A0D9SFI3 127 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 MBLAC1A4D2B0 266 aaPredicted RBP11.18□□□□□ -0.62
SH3D21-204ENST00000496636 SPATA31C2B4DYI2 1134 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 M0QZ92 97 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 SCG2P13521 617 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 PAN2Q504Q3 1202 aaKnown RBP11.18□□□□□ -0.62
SH3D21-204ENST00000496636 UTP14CQ5TAP6 766 aaKnown RBP11.18□□□□□ -0.62
SH3D21-204ENST00000496636 IER5Q5VY09 327 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 XRRA1Q6P2D8 792 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 RUFY4Q6ZNE9 571 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 CRIPAKQ8N1N5 446 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 KREMEN2Q8NCW0 462 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 OTUD7AQ8TE49 926 aaPredicted RBP11.18□□□□□ -0.62
SH3D21-204ENST00000496636 MTMR8Q96EF0 704 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 ZSCAN10Q96SZ4 725 aaPredicted RBP11.18□□□□□ -0.62
SH3D21-204ENST00000496636 LRFN2Q9ULH4 789 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 CDY2AQ9Y6F7 541 aa11.18□□□□□ -0.62
SH3D21-204ENST00000496636 CD52P31358 61 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 PAK2Q13177 524 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 GRIK4Q16099 956 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 ASTLQ6HA08 431 aaPredicted RBP11.17□□□□□ -0.62
SH3D21-204ENST00000496636 ANKRD54Q6NXT1 300 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 FRMD5Q7Z6J6 570 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 FCHSD1Q86WN1 690 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 ADSSL1Q8N142 457 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 ENAHQ8N8S7 591 aaPredicted RBP11.17□□□□□ -0.62
SH3D21-204ENST00000496636 TMEM105Q8N8V8 129 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 VN1R2Q8NFZ6 395 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 FAM227BQ96M60 508 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 AGO3Q9H9G7 860 aaKnown RBP11.17□□□□□ -0.62
SH3D21-204ENST00000496636 ERAP1Q9NZ08 941 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
SH3D21-204ENST00000496636 LZTS1Q9Y250 596 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 ACACBO00763 2458 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 CEP250Q9BV73 2442 aa11.17□□□□□ -0.62
SH3D21-204ENST00000496636 SALL3Q9BXA9 1300 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 IGSF9BQ9UPX0 1349 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 DMXL1Q9Y485 3027 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 KLRF2D3W0D1 207 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 ZNF213O14771 459 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 PER2O15055 1255 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 PPP1R11O60927 126 aaPredicted RBP11.16□□□□□ -0.62
SH3D21-204ENST00000496636 FGF18O76093 207 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 TECP42680 631 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 CLCN5P51795 746 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 MRPS9P82933 396 aaKnown RBP11.16□□□□□ -0.62
SH3D21-204ENST00000496636 SP4Q02446 784 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 SPOUT1Q5T280 376 aaKnown RBP11.16□□□□□ -0.62
SH3D21-204ENST00000496636 ZNF589Q86UQ0 364 aaPredicted RBP11.16□□□□□ -0.62
SH3D21-204ENST00000496636 THNSL1Q8IYQ7 743 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 DNAJB3Q8WWF6 145 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 TNPO1Q92973 898 aaKnown RBP11.16□□□□□ -0.62
SH3D21-204ENST00000496636 CDHR1Q96JP9 859 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 UBAC1Q9BSL1 405 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 S1PR5Q9H228 398 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 MFSD1Q9H3U5 465 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 PCDHGC5Q9Y5F6 944 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 TRPV2Q9Y5S1 764 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 DNAH14Q0VDD8 3507 aa11.16□□□□□ -0.62
SH3D21-204ENST00000496636 MYH7BA7E2Y1 1941 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 RRN3P2A6NIE6 340 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 FSCN2O14926 492 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 PPFIA3O75145 1194 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 BRD1O95696 1058 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 LAG3P18627 525 aa11.15□□□□□ -0.62
SH3D21-204ENST00000496636 TCF7P36402 384 aaPredicted RBP11.15□□□□□ -0.62
SH3D21-204ENST00000496636 SARSP49591 514 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms