RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 ZNF302Q9NR11 478 aa25.69■■□□□ 1.7
CHRD-217ENST00000496527 PCDHA10Q9Y5I2 948 aa25.69■■□□□ 1.7
CHRD-217ENST00000496527 PSAPP07602 524 aa25.68■■□□□ 1.7
CHRD-217ENST00000496527 SLC26A2P50443 739 aa25.68■■□□□ 1.7
CHRD-217ENST00000496527 GNL2Q13823 731 aaKnown RBP25.68■■□□□ 1.7
CHRD-217ENST00000496527 SHHQ15465 462 aa25.68■■□□□ 1.7
CHRD-217ENST00000496527 SWSAP1Q6NVH7 229 aa25.68■■□□□ 1.7
CHRD-217ENST00000496527 ETNPPLQ8TBG4 499 aa25.68■■□□□ 1.7
CHRD-217ENST00000496527 AFAP1L1Q8TED9 768 aa25.68■■□□□ 1.7
CHRD-217ENST00000496527 LMBR1Q8WVP7 490 aa25.68■■□□□ 1.7
CHRD-217ENST00000496527 DHX38Q92620 1227 aaKnown RBP25.68■■□□□ 1.7
CHRD-217ENST00000496527 SCLYQ96I15 445 aa25.68■■□□□ 1.7
CHRD-217ENST00000496527 IL23AQ9NPF7 189 aa25.68■■□□□ 1.7
CHRD-217ENST00000496527 TRPC6Q9Y210 931 aa25.68■■□□□ 1.7
CHRD-217ENST00000496527 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.68■■□□□ 1.7
CHRD-217ENST00000496527 WDR64B1ANS9 1081 aa25.67■■□□□ 1.7
CHRD-217ENST00000496527 TREHO43280 583 aa25.67■■□□□ 1.7
CHRD-217ENST00000496527 MARCH6O60337 910 aa25.67■■□□□ 1.7
CHRD-217ENST00000496527 PSMD10O75832 226 aa25.67■■□□□ 1.7
CHRD-217ENST00000496527 PLCB4Q15147 1175 aa25.67■■□□□ 1.7
CHRD-217ENST00000496527 C9orf50Q5SZB4 431 aa25.67■■□□□ 1.7
CHRD-217ENST00000496527 PDXDC2PQ6P474 469 aa25.67■■□□□ 1.7
CHRD-217ENST00000496527 SERINC5Q86VE9 423 aa25.67■■□□□ 1.7
CHRD-217ENST00000496527 CCDC60Q8IWA6 550 aaPredicted RBP25.67■■□□□ 1.7
CHRD-217ENST00000496527 RPUSD2Q8IZ73 545 aaKnown RBP25.67■■□□□ 1.7
CHRD-217ENST00000496527 FAM20AQ96MK3 541 aa25.67■■□□□ 1.7
CHRD-217ENST00000496527 FOXP1Q9H334 677 aaPredicted RBP25.67■■□□□ 1.7
CHRD-217ENST00000496527 DISC1Q9NRI5 854 aa25.67■■□□□ 1.7
CHRD-217ENST00000496527 SMC3Q9UQE7 1217 aa25.67■■□□□ 1.7
CHRD-217ENST00000496527 CHMP2AO43633 222 aa25.66■■□□□ 1.7
CHRD-217ENST00000496527 IQCF3P0C7M6 154 aa25.66■■□□□ 1.7
CHRD-217ENST00000496527 ACRP10323 421 aa25.66■■□□□ 1.7
CHRD-217ENST00000496527 GJB2P29033 226 aa25.66■■□□□ 1.7
CHRD-217ENST00000496527 SFNP31947 248 aa25.66■■□□□ 1.7
CHRD-217ENST00000496527 JAK3P52333 1124 aa25.66■■□□□ 1.7
CHRD-217ENST00000496527 GRIK4Q16099 956 aa25.66■■□□□ 1.7
CHRD-217ENST00000496527 UNC45AQ9H3U1 944 aa25.66■■□□□ 1.7
CHRD-217ENST00000496527 POTEB3A0JP26 581 aa25.65■■□□□ 1.7
CHRD-217ENST00000496527 CKBP12277 381 aa25.65■■□□□ 1.7
CHRD-217ENST00000496527 INSRRP14616 1297 aa25.65■■□□□ 1.7
CHRD-217ENST00000496527 SELPP16109 830 aa25.65■■□□□ 1.7
CHRD-217ENST00000496527 RFC2P35250 354 aa25.65■■□□□ 1.7
CHRD-217ENST00000496527 ADAM17P78536 824 aa25.65■■□□□ 1.7
CHRD-217ENST00000496527 RBL2Q08999 1139 aa25.65■■□□□ 1.7
CHRD-217ENST00000496527 PSRC1Q6PGN9 363 aaPredicted RBP25.65■■□□□ 1.7
CHRD-217ENST00000496527 POTEBQ6S5H4 581 aa25.65■■□□□ 1.7
CHRD-217ENST00000496527 C16orf59Q7L2K0 433 aa25.65■■□□□ 1.7
CHRD-217ENST00000496527 KCNMB3Q9NPA1 279 aa25.65■■□□□ 1.7
CHRD-217ENST00000496527 RRN3P2A6NIE6 340 aa25.64■■□□□ 1.7
CHRD-217ENST00000496527 TBX3O15119 743 aa25.64■■□□□ 1.7
CHRD-217ENST00000496527 BAG4O95429 457 aaKnown RBP25.64■■□□□ 1.7
CHRD-217ENST00000496527 IGBP1P78318 339 aa25.64■■□□□ 1.7
CHRD-217ENST00000496527 TRIM71Q2Q1W2 868 aaKnown RBP25.64■■□□□ 1.7
CHRD-217ENST00000496527 LRRC8DQ7L1W4 858 aa25.64■■□□□ 1.7
CHRD-217ENST00000496527 MIER3Q7Z3K6 550 aa25.64■■□□□ 1.7
CHRD-217ENST00000496527 CKAP2LQ8IYA6 745 aa25.64■■□□□ 1.7
CHRD-217ENST00000496527 RDM1Q8NG50 284 aa25.64■■□□□ 1.7
CHRD-217ENST00000496527 WNT8BQ93098 351 aa25.64■■□□□ 1.7
CHRD-217ENST00000496527 RNPC3Q96LT9 517 aaKnown RBP25.64■■□□□ 1.7
CHRD-217ENST00000496527 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.64■■□□□ 1.75e-7■□□□□ 9.4
CHRD-217ENST00000496527 GABBR1Q9UBS5 961 aa25.64■■□□□ 1.7
CHRD-217ENST00000496527 MAFBQ9Y5Q3 323 aaPredicted RBP25.64■■□□□ 1.7
CHRD-217ENST00000496527 TRIP12Q14669 1992 aaPredicted RBP25.64■■□□□ 1.69
CHRD-217ENST00000496527 HBP1O60381 514 aa25.63■■□□□ 1.69
CHRD-217ENST00000496527 THPOP40225 353 aa25.63■■□□□ 1.69
CHRD-217ENST00000496527 LRIT3Q3SXY7 679 aa25.63■■□□□ 1.69
CHRD-217ENST00000496527 TMEM240Q5SV17 173 aa25.63■■□□□ 1.69
CHRD-217ENST00000496527 ZNF365Q70YC5 407 aa25.63■■□□□ 1.69
CHRD-217ENST00000496527 DEFB128Q7Z7B8 93 aa25.63■■□□□ 1.69
CHRD-217ENST00000496527 POTEDQ86YR6 584 aa25.63■■□□□ 1.69
CHRD-217ENST00000496527 ATP8B4Q8TF62 1192 aa25.63■■□□□ 1.69
CHRD-217ENST00000496527 TUBE1Q9UJT0 475 aa25.63■■□□□ 1.69
CHRD-217ENST00000496527 PARNO95453 639 aaKnown RBP25.62■■□□□ 1.69
CHRD-217ENST00000496527 FGBP02675 491 aa25.62■■□□□ 1.69
CHRD-217ENST00000496527 PFKMP08237 780 aa25.62■■□□□ 1.69
CHRD-217ENST00000496527 ATP2B1P20020 1258 aa25.62■■□□□ 1.69
CHRD-217ENST00000496527 ZNF618Q5T7W0 954 aa25.62■■□□□ 1.69
CHRD-217ENST00000496527 NOSTRINQ8IVI9 506 aa25.62■■□□□ 1.69
CHRD-217ENST00000496527 SLFN12Q8IYM2 578 aa25.62■■□□□ 1.69
CHRD-217ENST00000496527 KAT6AQ92794 2004 aa25.62■■□□□ 1.69
CHRD-217ENST00000496527 RANBP2P49792 3224 aaKnown RBP25.61■■□□□ 1.69
CHRD-217ENST00000496527 CUL4AQ13619 759 aa25.61■■□□□ 1.69
CHRD-217ENST00000496527 MARCH8Q5T0T0 291 aa25.61■■□□□ 1.69
CHRD-217ENST00000496527 TAF2Q6P1X5 1199 aa25.61■■□□□ 1.69
CHRD-217ENST00000496527 B3GNT9Q6UX72 402 aa25.61■■□□□ 1.69
CHRD-217ENST00000496527 HAS1Q92839 578 aa25.61■■□□□ 1.69
CHRD-217ENST00000496527 MBLAC1A4D2B0 266 aaPredicted RBP25.6■■□□□ 1.69
CHRD-217ENST00000496527 H3BQV1 296 aa25.6■■□□□ 1.69
CHRD-217ENST00000496527 NEMFO60524 1076 aa25.6■■□□□ 1.69
CHRD-217ENST00000496527 CAND2O75155 1236 aa25.6■■□□□ 1.69
CHRD-217ENST00000496527 ATP4AP20648 1035 aa25.6■■□□□ 1.69
CHRD-217ENST00000496527 FXR1P51114 621 aaKnown RBP eCLIP25.6■■□□□ 1.69
CHRD-217ENST00000496527 PPP2R5CQ13362 524 aa25.6■■□□□ 1.69
CHRD-217ENST00000496527 CALCRLQ16602 461 aa25.6■■□□□ 1.69
CHRD-217ENST00000496527 TRMT1LQ7Z2T5 733 aaKnown RBP25.6■■□□□ 1.69
CHRD-217ENST00000496527 BBXQ8WY36 941 aaPredicted RBP25.6■■□□□ 1.69
CHRD-217ENST00000496527 FAM167AQ96KS9 214 aa25.6■■□□□ 1.69
CHRD-217ENST00000496527 FTOQ9C0B1 505 aaKnown RBP eCLIP25.6■■□□□ 1.69
CHRD-217ENST00000496527 IGSF9BQ9UPX0 1349 aa25.6■■□□□ 1.69
CHRD-217ENST00000496527 RSPH10B2B2RC85 870 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms