RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SLC26A2P50443 739 aa17.89■□□□□ 0.45
HDAC4-213ENST00000496347 IKBKEQ14164 716 aa17.89■□□□□ 0.45
HDAC4-213ENST00000496347 GRIK4Q16099 956 aa17.89■□□□□ 0.45
HDAC4-213ENST00000496347 TNPO1Q92973 898 aaKnown RBP17.89■□□□□ 0.45
HDAC4-213ENST00000496347 VPS54Q9P1Q0 977 aa17.89■□□□□ 0.45
HDAC4-213ENST00000496347 COL4A6Q14031 1691 aa17.89■□□□□ 0.45
HDAC4-213ENST00000496347 CDKL5O76039 1030 aa17.88■□□□□ 0.45
HDAC4-213ENST00000496347 DEXIO95424 95 aa17.88■□□□□ 0.45
HDAC4-213ENST00000496347 CA3P07451 260 aa17.88■□□□□ 0.45
HDAC4-213ENST00000496347 CTSHP09668 335 aa17.88■□□□□ 0.45
HDAC4-213ENST00000496347 SSRP1Q08945 709 aaKnown RBP17.88■□□□□ 0.45
HDAC4-213ENST00000496347 MKRN4PQ13434 485 aaPredicted RBP17.88■□□□□ 0.45
HDAC4-213ENST00000496347 PLEKHG4Q58EX7 1191 aa17.88■□□□□ 0.45
HDAC4-213ENST00000496347 PLPPR4Q7Z2D5 763 aa17.88■□□□□ 0.45
HDAC4-213ENST00000496347 RSPH3Q86UC2 560 aa17.88■□□□□ 0.45
HDAC4-213ENST00000496347 PLA2G4DQ86XP0 818 aa17.88■□□□□ 0.45
HDAC4-213ENST00000496347 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.88■□□□□ 0.45
HDAC4-213ENST00000496347 IL17RAQ96F46 866 aa17.88■□□□□ 0.45
HDAC4-213ENST00000496347 PCYT2Q99447 389 aa17.88■□□□□ 0.45
HDAC4-213ENST00000496347 PRDM12Q9H4Q4 367 aa17.88■□□□□ 0.45
HDAC4-213ENST00000496347 IPO5O00410 1097 aaKnown RBP17.87■□□□□ 0.45
HDAC4-213ENST00000496347 MYOGP15173 224 aa17.87■□□□□ 0.45
HDAC4-213ENST00000496347 CIITAP33076 1130 aa17.87■□□□□ 0.45
HDAC4-213ENST00000496347 FAM26DQ5JW98 314 aa17.87■□□□□ 0.45
HDAC4-213ENST00000496347 C22orf23Q9BZE7 217 aa17.87■□□□□ 0.45
HDAC4-213ENST00000496347 TCEAL9Q9UHQ7 104 aa17.87■□□□□ 0.45
HDAC4-213ENST00000496347 RRN3P2A6NIE6 340 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 TLL1O43897 1013 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 PPFIA3O75145 1194 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 ATG7O95352 703 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 CCNE2O96020 404 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 STAT5BP51692 787 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 DEFB103AP81534 67 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 ANKRD1Q15327 319 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 GALNT17Q6IS24 598 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 RASGRP4Q8TDF6 673 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 SEPT8Q92599 483 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 APBB2Q92870 758 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 ZNF577Q9BSK1 485 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 TBC1D22BQ9NU19 505 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 TRPC6Q9Y210 931 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 STK36Q9NRP7 1315 aa17.86■□□□□ 0.45
HDAC4-213ENST00000496347 IGKV6D-21A0A0A0MT36 114 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 ADAMTS3O15072 1205 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 GJB5O95377 273 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 NLRP5P59047 1200 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 KRT76Q01546 638 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 TCTN1Q2MV58 587 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 PRR16Q569H4 304 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 PRRC2BQ5JSZ5 2229 aaKnown RBP17.85■□□□□ 0.45
HDAC4-213ENST00000496347 MARCH8Q5T0T0 291 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 FAM160B1Q5W0V3 765 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 ZNF746Q6NUN9 644 aaPredicted RBP17.85■□□□□ 0.45
HDAC4-213ENST00000496347 RUFY4Q6ZNE9 571 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 SMAP1Q8IYB5 467 aaPredicted RBP17.85■□□□□ 0.45
HDAC4-213ENST00000496347 DAGLBQ8NCG7 672 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 DBF4BQ8NFT6 615 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 PCDHA4Q9UN74 947 aa17.85■□□□□ 0.45
HDAC4-213ENST00000496347 COL1A2P08123 1366 aa17.84■□□□□ 0.45
HDAC4-213ENST00000496347 DDX39AO00148 427 aaKnown RBP17.84■□□□□ 0.45
HDAC4-213ENST00000496347 BACH1O14867 736 aa17.84■□□□□ 0.45
HDAC4-213ENST00000496347 DHX15O43143 795 aaKnown RBP17.84■□□□□ 0.45
HDAC4-213ENST00000496347 AMHP03971 560 aa17.84■□□□□ 0.45
HDAC4-213ENST00000496347 INSRRP14616 1297 aa17.84■□□□□ 0.45
HDAC4-213ENST00000496347 STK3Q13188 491 aa17.84■□□□□ 0.45
HDAC4-213ENST00000496347 PLCB4Q15147 1175 aa17.84■□□□□ 0.45
HDAC4-213ENST00000496347 MIS18BP1Q6P0N0 1132 aa17.84■□□□□ 0.45
HDAC4-213ENST00000496347 ABHD15Q6UXT9 468 aa17.84■□□□□ 0.45
HDAC4-213ENST00000496347 LENG9Q96B70 501 aa17.84■□□□□ 0.45
HDAC4-213ENST00000496347 ZBED2Q9BTP6 218 aa17.84■□□□□ 0.45
HDAC4-213ENST00000496347 IFIH1Q9BYX4 1025 aaKnown RBP17.84■□□□□ 0.45
HDAC4-213ENST00000496347 SLKQ9H2G2 1235 aaPredicted RBP17.84■□□□□ 0.45
HDAC4-213ENST00000496347 LOXHD1Q8IVV2 1947 aa17.84■□□□□ 0.45
HDAC4-213ENST00000496347 POTEB3A0JP26 581 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 PFKFB2O60825 505 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 USP11P51784 963 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 TAP1Q03518 808 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 MGAT3Q09327 533 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 SCRN1Q12765 414 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 ADGRE1Q14246 886 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 POTEBQ6S5H4 581 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 CCDC60Q8IWA6 550 aaPredicted RBP17.83■□□□□ 0.44
HDAC4-213ENST00000496347 ATP8B4Q8TF62 1192 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 RAD9AQ99638 391 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 NCOR1O75376 2440 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 XIRP2A4UGR9 3374 aa17.83■□□□□ 0.44
HDAC4-213ENST00000496347 RALGAPA2Q2PPJ7 1873 aa17.82■□□□□ 0.44
HDAC4-213ENST00000496347 SPTBN5Q9NRC6 3674 aaKnown RBP17.82■□□□□ 0.44
HDAC4-213ENST00000496347 IGSF9BQ9UPX0 1349 aa17.82■□□□□ 0.44
HDAC4-213ENST00000496347 CHRNA1P02708 482 aa17.82■□□□□ 0.44
HDAC4-213ENST00000496347 IGBP1P78318 339 aa17.82■□□□□ 0.44
HDAC4-213ENST00000496347 MRPS6P82932 125 aaKnown RBP17.82■□□□□ 0.44
HDAC4-213ENST00000496347 BLIDQ8IZY5 108 aa17.82■□□□□ 0.44
HDAC4-213ENST00000496347 LARP6Q9BRS8 491 aaKnown RBP17.82■□□□□ 0.44
HDAC4-213ENST00000496347 ZNF302Q9NR11 478 aa17.82■□□□□ 0.44
HDAC4-213ENST00000496347 TPCN1Q9ULQ1 816 aa17.82■□□□□ 0.44
HDAC4-213ENST00000496347 PCDHA2Q9Y5H9 948 aa17.82■□□□□ 0.44
HDAC4-213ENST00000496347 NLRC5Q86WI3 1866 aa17.82■□□□□ 0.44
HDAC4-213ENST00000496347 MUC3AQ02505 3323 aa17.81■□□□□ 0.44
HDAC4-213ENST00000496347 WDR64B1ANS9 1081 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms