RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	PCDH19	Q8TAB3	1148 aa		4.02	□□□□□ -1.77
RAD50-208	ENST00000496204	TACO1	Q9BSH4	297 aa	Known RBP	4.02	□□□□□ -1.77
RAD50-208	ENST00000496204	DEF6	Q9H4E7	631 aa		4.02	□□□□□ -1.77
RAD50-208	ENST00000496204	SRPK3	Q9UPE1	567 aa		4.02	□□□□□ -1.77
RAD50-208	ENST00000496204	CCDC9	Q9Y3X0	531 aa	Known RBP	4.02	□□□□□ -1.77
RAD50-208	ENST00000496204	TESMIN	Q9Y4I5	508 aa		4.02	□□□□□ -1.77
RAD50-208	ENST00000496204	NUB1	Q9Y5A7	615 aa		4.02	□□□□□ -1.77
RAD50-208	ENST00000496204		H0Y858	1186 aa		4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	ARVCF	O00192	962 aa		4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	MAN2B1	O00754	1011 aa		4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	AMH	P03971	560 aa		4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	PTPN1	P18031	435 aa	Known RBP	4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	PAK1	Q13153	545 aa		4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	TOP3A	Q13472	1001 aa	Predicted RBP	4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	FAM209A	Q5JX71	171 aa		4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	ARHGAP36	Q6ZRI8	547 aa		4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	SCUBE1	Q8IWY4	988 aa		4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	LMF1	Q96S06	567 aa		4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	ALG1	Q9BT22	464 aa		4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	CBLC	Q9ULV8	474 aa		4.01	□□□□□ -1.77
RAD50-208	ENST00000496204	MATN2	O00339	956 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	PDPK1	O15530	556 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	DIAPH1	O60610	1272 aa	Known RBP	4	□□□□□ -1.77
RAD50-208	ENST00000496204	PDE6A	P16499	860 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	POLD1	P28340	1107 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	DUSP8	Q13202	625 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	RASGRF1	Q13972	1273 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	USP10	Q14694	798 aa	Known RBP	4	□□□□□ -1.77
RAD50-208	ENST00000496204	SEC23A	Q15436	765 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	GPR19	Q15760	415 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	RNF151	Q2KHN1	245 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	BTBD8	Q5XKL5	378 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204		Q6ZSN1	163 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	MAMDC2	Q7Z304	686 aa	Predicted RBP	4	□□□□□ -1.77
RAD50-208	ENST00000496204	OSTM1	Q86WC4	334 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	PTRH1	Q86Y79	214 aa	Known RBP	4	□□□□□ -1.77
RAD50-208	ENST00000496204	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4	□□□□□ -1.77
RAD50-208	ENST00000496204	PTPRN2	Q92932	1015 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	NEIL1	Q96FI4	390 aa	Predicted RBP	4	□□□□□ -1.77
RAD50-208	ENST00000496204	EXOC2	Q96KP1	924 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	VPS11	Q9H270	941 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	BTBD7	Q9P203	1132 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	SRRD	Q9UH36	339 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	TCAF1	Q9Y4C2	921 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	PCDHA8	Q9Y5H6	950 aa		4	□□□□□ -1.77
RAD50-208	ENST00000496204	TRBV23-1	A0A0A0MS06	115 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	ESYT3	A0FGR9	886 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	ZNF561-AS1	K7EIQ3	104 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	AQP7	O14520	342 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	MUSK	O15146	869 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	PLSCR1	O15162	318 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	MPIG6B	O95866	241 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	C4BPA	P04003	597 aa	Known RBP	3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	FAM153B	P0C7A2	387 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	PYGM	P11217	842 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	JAM2	P57087	298 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	NOLC1	Q14978	699 aa	Known RBP eCLIP	3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	TBR1	Q16650	682 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	C16orf59	Q7L2K0	433 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	DPH6	Q7L8W6	267 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	TAX1BP1	Q86VP1	789 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	FUK	Q8N0W3	1084 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	NLGN4X	Q8N0W4	816 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	FBXW5	Q969U6	566 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	LRRC37B	Q96QE4	947 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	CARD11	Q9BXL7	1154 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	CCDC113	Q9H0I3	377 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	SEMA4A	Q9H3S1	761 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	SMURF1	Q9HCE7	757 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	PFDN2	Q9UHV9	154 aa		3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	ZFR2	Q9UPR6	939 aa	Known RBP	3.99	□□□□□ -1.77
RAD50-208	ENST00000496204	CYR61	O00622	381 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	CUTA	O60888	179 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	AOAH	P28039	575 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	GDF5	P43026	501 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	SUMO1	P63165	101 aa	Known RBP	3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	IL13RA1	P78552	427 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	STIL	Q15468	1287 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	FIGN	Q5HY92	759 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	AGBL4	Q5VU57	503 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	FSTL4	Q6MZW2	842 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	LARP4	Q71RC2	724 aa	Known RBP eCLIP	3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	NPM2	Q86SE8	214 aa	Known RBP	3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	MTDH	Q86UE4	582 aa	Known RBP	3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	ZFPM1	Q8IX07	1006 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	CFHR4	Q92496	578 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	EDA	Q92838	391 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	TRIM55	Q9BYV6	548 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	ZDHHC5	Q9C0B5	715 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	RIC8B	Q9NVN3	520 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	PCDHA9	Q9Y5H5	950 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	ATP23	Q9Y6H3	246 aa		3.98	□□□□□ -1.77
RAD50-208	ENST00000496204	KCNK3	O14649	394 aa		3.97	□□□□□ -1.77
RAD50-208	ENST00000496204	FZD7	O75084	574 aa		3.97	□□□□□ -1.77
RAD50-208	ENST00000496204	CLASP2	O75122	1294 aa	Known RBP	3.97	□□□□□ -1.77
RAD50-208	ENST00000496204	STK10	O94804	968 aa	Known RBP	3.97	□□□□□ -1.77
RAD50-208	ENST00000496204	CRTAM	O95727	393 aa		3.97	□□□□□ -1.77
RAD50-208	ENST00000496204	PTGS1	P23219	599 aa		3.97	□□□□□ -1.77
RAD50-208	ENST00000496204	MC4R	P32245	332 aa		3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms