RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 NFRKBQ6P4R8 1299 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 ERCC4Q92889 916 aaPredicted RBP9.53□□□□□ -0.88
VPS13B-206ENST00000496144 INO80BQ9C086 356 aaPredicted RBP9.53□□□□□ -0.88
VPS13B-206ENST00000496144 CYP39A1Q9NYL5 469 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 THEGQ9P2T0 379 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 A0A087WWV3 80 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.53□□□□□ -0.88
VPS13B-206ENST00000496144 NMT2O60551 498 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 CNMDO75829 334 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 PSAPP07602 524 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 RPS6P62753 249 aaKnown RBP9.53□□□□□ -0.88
VPS13B-206ENST00000496144 SETQ01105 290 aaPredicted RBP9.53□□□□□ -0.88
VPS13B-206ENST00000496144 TROAPQ12815 778 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 PPFIA1Q13136 1202 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 GRM4Q14833 912 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 DPCR1Q3MIW9 517 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 RUFY4Q6ZNE9 571 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 TNFRSF25Q93038 417 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 PCDHB7Q9Y5E2 793 aa9.53□□□□□ -0.88
VPS13B-206ENST00000496144 PIGSQ96S52 555 aa9.52□□□□□ -0.88
VPS13B-206ENST00000496144 PDHBP11177 359 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 MOGSQ13724 837 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 NBPF20Q3BBV1 942 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 KRBA2Q6ZNG9 492 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 FAM43BQ6ZT52 329 aaPredicted RBP9.52□□□□□ -0.89
VPS13B-206ENST00000496144 DRC7Q8IY82 874 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 URGCPQ8TCY9 931 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 PCDHB6Q9Y5E3 794 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 ZNF536O15090 1300 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 RSPH10B2B2RC85 870 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 NCK2O43639 380 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 RSPH10BP0C881 870 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 RRP1BQ14684 758 aaKnown RBP9.52□□□□□ -0.89
VPS13B-206ENST00000496144 KIAA1524Q8TCG1 905 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 ANKS1AQ92625 1134 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 SRPRBQ9Y5M8 271 aaKnown RBP9.52□□□□□ -0.89
VPS13B-206ENST00000496144 STK24Q9Y6E0 443 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 GREB1LQ9C091 1923 aaPredicted RBP9.52□□□□□ -0.89
VPS13B-206ENST00000496144 A0A1W2PRG0 241 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 PNOCQ13519 176 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 FAM117BQ6P1L5 589 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 OTUD6AQ7L8S5 288 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 UIMC1Q96RL1 719 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 HCN4Q9Y3Q4 1203 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 MAFGO15525 162 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 MATR3P43243 847 aaKnown RBP eCLIP9.52□□□□□ -0.899e-6■■■■□ 23
VPS13B-206ENST00000496144 KRT17Q04695 432 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 PAK2Q13177 524 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 AP3B2Q13367 1082 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 TIGD5Q53EQ6 642 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 CNKSR3Q6P9H4 555 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 SRBD1Q8N5C6 995 aaKnown RBP9.52□□□□□ -0.89
VPS13B-206ENST00000496144 TEKT3Q9BXF9 490 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 VPS54Q9P1Q0 977 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 KCNH3Q9ULD8 1083 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 PCDHB12Q9Y5F1 795 aa9.52□□□□□ -0.89
VPS13B-206ENST00000496144 UPP2O95045 317 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 NR5A1Q13285 461 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 PUS10Q3MIT2 529 aaKnown RBP9.51□□□□□ -0.89
VPS13B-206ENST00000496144 MAMDC4Q6UXC1 1216 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 OTOP2Q7RTS6 562 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 TEX2Q8IWB9 1127 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 AKT3Q9Y243 479 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 MYH8P13535 1937 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 CNTN2Q02246 1040 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 FIBCD1Q8N539 461 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 AFG1LQ8WV93 481 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 SMTNL1A8MU46 457 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 BECN2A8MW95 431 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 IKBKBO14920 756 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 SLURP2P0DP57 97 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 MTMR1Q13613 665 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 TTBK2Q6IQ55 1244 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 TRIM6Q9C030 488 aaPredicted RBP9.51□□□□□ -0.89
VPS13B-206ENST00000496144 DNAI2Q9GZS0 605 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 NKX2-4Q9H2Z4 354 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 SH3GLB2Q9NR46 395 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 IL17RBQ9NRM6 502 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 FAM13BQ9NYF5 915 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 ABHD14A-ACY1A0A1B0GW23 586 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 ACRP10323 421 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 CST5P28325 142 aaPredicted RBP9.51□□□□□ -0.89
VPS13B-206ENST00000496144 NT5DC1Q5TFE4 455 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 CCDC186Q7Z3E2 898 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 C17orf53Q8N3J3 647 aaPredicted RBP9.51□□□□□ -0.89
VPS13B-206ENST00000496144 PHOSPHO2Q8TCD6 241 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 ERAP1Q9NZ08 941 aa9.51□□□□□ -0.89
VPS13B-206ENST00000496144 KIAA0355O15063 1070 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 ZRSR1Q15695 479 aaKnown RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 PFKFB3Q16875 520 aaPredicted RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 LONRF3Q496Y0 759 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 DDX39AO00148 427 aaKnown RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 CAND2O75155 1236 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 PPFIA4O75335 1185 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 TPM4P67936 248 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 MRPS5P82675 430 aaKnown RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 RNASELQ05823 741 aaKnown RBP9.5□□□□□ -0.89
VPS13B-206ENST00000496144 TFDP1Q14186 410 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 NPY5RQ15761 445 aa9.5□□□□□ -0.89
VPS13B-206ENST00000496144 TAF2Q6P1X5 1199 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms