RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 C2CD4DB7Z1M9 353 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 ASGR2P07307 311 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 ADRB1P08588 477 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 RPS6P62753 249 aaKnown RBP11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 DUSP6Q16828 381 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 CCDC96Q2M329 555 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 SBK1Q52WX2 424 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 ANKRD54Q6NXT1 300 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 VN1R2Q8NFZ6 395 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 PPTC7Q8NI37 304 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 ARHGAP45Q92619 1136 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 ZNF689Q96CS4 500 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 NECTIN4Q96NY8 510 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 RANBP17Q9H2T7 1088 aaKnown RBP11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 SH2B1Q9NRF2 756 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
SMARCAL1-213ENST00000496037 ANKRD11Q6UB99 2663 aaPredicted RBP11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 BHMG1C9JSJ3 638 aaPredicted RBP11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 PI15O43692 258 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 PPFIA3O75145 1194 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 CT47B1P0C2W7 299 aaPredicted RBP11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 RFX1P22670 979 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 ATP8B2P98198 1209 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 LAMC2Q13753 1193 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 HIC1Q14526 733 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 PROX2Q3B8N5 592 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 RCSD1Q6JBY9 416 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 CES5AQ6NT32 575 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 ERC1Q8IUD2 1116 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 CMTR2Q8IYT2 770 aaKnown RBP11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 TDRD5Q8NAT2 981 aaKnown RBP11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 EMID1Q96A84 441 aaPredicted RBP11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 S1PR5Q9H228 398 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 PAG1Q9NWQ8 432 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 NCDNQ9UBB6 729 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 PNMA2Q9UL42 364 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 FAM208BQ5VWN6 2430 aa11.3□□□□□ -0.6
SMARCAL1-213ENST00000496037 DGKIO75912 1065 aa11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 HOXB8P17481 243 aaPredicted RBP11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 UBE3AQ05086 875 aa11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 UBE3CQ15386 1083 aa11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 GPR161Q8N6U8 529 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 NEDD1Q8NHV4 660 aa11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 CLEC4DQ8WXI8 215 aa11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 RIN2Q8WYP3 895 aaPredicted RBP11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 RTKNQ9BST9 563 aa11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 OSBPL7Q9BZF2 842 aa11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 FBXL21Q9UKT6 434 aa11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 STX8Q9UNK0 236 aa11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 SPTBN2O15020 2390 aa11.29□□□□□ -0.6
SMARCAL1-213ENST00000496037 PRR5-ARHGAP8B1AHC4 643 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 TREHO43280 583 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 RARSP54136 660 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 ARHGAP8P85298 464 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 LMNB2Q03252 620 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 SLFN5Q08AF3 891 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 PAN2Q504Q3 1202 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 LLGL2Q6P1M3 1020 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 GIMAP6Q6P9H5 292 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 SYCE2Q6PIF2 218 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 TMEM184AQ6ZMB5 413 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 FAM9BQ8IZU0 186 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 POMKQ9H5K3 350 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 MRVI1Q9Y6F6 885 aa11.28□□□□□ -0.6
SMARCAL1-213ENST00000496037 OTOGLQ3ZCN5 2332 aa11.27□□□□□ -0.6
SMARCAL1-213ENST00000496037 DCDC2BA2VCK2 349 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 KINO60870 393 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 PPFIA4O75335 1185 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 SMIM10L2AP0DMW4 78 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 SMIM10L2BP0DMW5 78 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 GHRP10912 638 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 GNAT1P11488 350 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 NPR3P17342 541 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 TDO2P48775 406 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 TFAP4Q01664 338 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 STXBP2Q15833 593 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 SPOUT1Q5T280 376 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 SYDE2Q5VT97 1194 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 PDE12Q6L8Q7 609 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 ZSCAN25Q6NSZ9 544 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 RASGRP2Q7LDG7 609 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 ZDHHC14Q8IZN3 488 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 SIX5Q8N196 739 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 SECISBP2LQ93073 1101 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 PUS7LQ9H0K6 701 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 ERVK-5Q9HDB9 667 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 IL1RAPL2Q9NP60 686 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 LIMD1Q9UGP4 676 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 DDX41Q9UJV9 622 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 PCDHB12Q9Y5F1 795 aa11.27□□□□□ -0.61
SMARCAL1-213ENST00000496037 GOLGA8CPA6NN73 597 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 ENPP3O14638 875 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 IPO8O15397 1037 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 HOXD8P13378 290 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 SLC16A2P36021 539 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 MTHFRP42898 656 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 ITIH3Q06033 890 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 RASGRP4Q8TDF6 673 aa11.26□□□□□ -0.61
SMARCAL1-213ENST00000496037 NSUN6Q8TEA1 469 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms