RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 TARSL2A2RTX5 802 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 PRR23AA6NEV1 266 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 FYNP06241 537 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 CA4P22748 312 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 SERPINH1P50454 418 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 ARF3P61204 181 aaPredicted RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 ARF1P84077 181 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 GRSF1Q12849 480 aaKnown RBP eCLIP5.54□□□□□ -1.52
NF1-216ENST00000495910 HERC4Q5GLZ8 1057 aaPredicted RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 CYP4F22Q6NT55 531 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 WDR48Q8TAF3 677 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 NEK9Q8TD19 979 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 NHEJ1Q9H9Q4 299 aaPredicted RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 GTSE1Q9NYZ3 720 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 SYNPO2Q9UMS6 1093 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 GRIN2BQ13224 1484 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 CENPXA8MT69 81 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 SUPT3HB4E1H0 165 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 ZBTB39O15060 712 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 CTIFO43310 598 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 ATP12AP54707 1039 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 DCTN2Q13561 401 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 LAMB3Q13751 1172 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 PASD1Q8IV76 773 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 NDUFAF2Q8N183 169 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 TNIP2Q8NFZ5 429 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 COG1Q8WTW3 980 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 EXT2Q93063 718 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 B3GALT6Q96L58 329 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 NLRC4Q9NPP4 1024 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 C1orf112Q9NSG2 853 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 RNF103O00237 685 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 COPEO14579 308 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 P4HA2O15460 535 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 ZNF189O75820 626 aaPredicted RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 H2AFZP0C0S5 128 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 ELF1P32519 619 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 NUP107P57740 925 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 H2AFVQ71UI9 128 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 MNTQ99583 582 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 CUEDC2Q9H467 287 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 AZI2Q9H6S1 392 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 EPB41L5Q9HCM4 733 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 RNF14Q9UBS8 474 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 ZNF215Q9UL58 517 aaPredicted RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 MAPK8IP1Q9UQF2 711 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 FAM32AQ9Y421 112 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 NFE2L3Q9Y4A8 694 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 CYTH3O43739 400 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 SEC31AO94979 1220 aaKnown RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 COPB2P35606 906 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 PDE6BP35913 854 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 EIF2B2P49770 351 aaKnown RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 NSUN2Q08J23 767 aaKnown RBP eCLIP5.53□□□□□ -1.52
NF1-216ENST00000495910 PARP10Q53GL7 1025 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 FASTKD1Q53R41 847 aaKnown RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 BEND6Q5SZJ8 279 aaPredicted RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 KANK4Q5T7N3 995 aaPredicted RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 DAB2IPQ5VWQ8 1189 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 PPP1R2P3Q6NXS1 205 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 DNMBPQ6XZF7 1577 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 INTS4Q96HW7 963 aaKnown RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 MTA3Q9BTC8 594 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 CASS4Q9NQ75 786 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 PCDHGB4Q9UN71 923 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 SH3GLB1Q9Y371 365 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 PTPRCP08575 1304 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 CCNT1O60563 726 aaKnown RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 HOXA7P31268 230 aaPredicted RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 PLTPP55058 493 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 SHROOM1Q2M3G4 852 aaPredicted RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 UBE2Q1Q7Z7E8 422 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 CYGBQ8WWM9 190 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 MRGBPQ9NV56 204 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 TBK1Q9UHD2 729 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 SLC12A6Q9UHW9 1150 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 STOML2Q9UJZ1 356 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 CPSF3Q9UKF6 684 aaKnown RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 AP4S1Q9Y587 144 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 WDR97A6NE52 1622 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 MAGEB6P1A0A0J9YX57 407 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 KRT37O76014 449 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 LGALS3BPQ08380 585 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 NR1H3Q13133 447 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 LDHAL6AQ6ZMR3 332 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 TTLL7Q6ZT98 887 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 DIS3LQ8TF46 1054 aaKnown RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 RPRD1BQ9NQG5 326 aaKnown RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 CDC23Q9UJX2 597 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 SLC8A2Q9UPR5 921 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 ABCE1P61221 599 aaKnown RBP5.53□□□□□ -1.52
NF1-216ENST00000495910 PICALMQ13492 652 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 COG2Q14746 738 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 SGO2Q562F6 1265 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 ANO1Q5XXA6 986 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 KRT39Q6A163 491 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 TTC17Q96AE7 1141 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 ULK4Q96C45 1275 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 HIC2Q96JB3 615 aa5.53□□□□□ -1.52
NF1-216ENST00000495910 RMI1Q9H9A7 625 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms