RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 LUC7LQ9NQ29 371 aaKnown RBP8.02□□□□□ -1.13
CCDC39-207ENST00000495817 PHLDB1Q86UU1 1377 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 FFAR3O14843 346 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 SLC27A2O14975 620 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 GLRX3O76003 335 aaKnown RBP8.01□□□□□ -1.13
CCDC39-207ENST00000495817 S100BP04271 92 aaPredicted RBP8.01□□□□□ -1.13
CCDC39-207ENST00000495817 BPIP17213 487 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 STAT5AP42229 794 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 ITGA1P56199 1179 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 ST5P78524 1137 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 GPR19Q15760 415 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 FIGNQ5HY92 759 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 RNF219Q5W0B1 726 aaPredicted RBP8.01□□□□□ -1.13
CCDC39-207ENST00000495817 KCTD1Q719H9 257 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 NLGN4XQ8N0W4 816 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 FAM26EQ8N5C1 309 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 ZBTB8AQ96BR9 441 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 TMEM209Q96SK2 561 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 TTC1Q99614 292 aa8.01□□□□□ -1.13
CCDC39-207ENST00000495817 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.01□□□□□ -1.13
CCDC39-207ENST00000495817 NKRFO15226 690 aaKnown RBP eCLIP8□□□□□ -1.13
CCDC39-207ENST00000495817 F2P00734 622 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 SRGAP2CP0DJJ0 459 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 COL6A2P12110 1019 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 EVA1CP58658 441 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 DLX2Q07687 328 aaPredicted RBP8□□□□□ -1.13
CCDC39-207ENST00000495817 TUSC3Q13454 348 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 TMEM177Q53S58 311 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 BRDTQ58F21 947 aaPredicted RBP8□□□□□ -1.13
CCDC39-207ENST00000495817 LIPIQ6XZB0 460 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 WDR66Q8TBY9 1149 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 USP7Q93009 1102 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 NOX5Q96PH1 765 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 IFT22Q9H7X7 185 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 CABP5Q9NP86 173 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 CATSPERZQ9NTU4 200 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 NTMQ9P121 344 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 KLHL42Q9P2K6 505 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 RAPGEFL1Q9UHV5 662 aa8□□□□□ -1.13
CCDC39-207ENST00000495817 ARID1BQ8NFD5 2236 aaPredicted RBP8□□□□□ -1.13
CCDC39-207ENST00000495817 CCDC66A2RUB6 948 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 M0R2C6 588 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 GPR39O43194 453 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 LRG1P02750 347 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 GJA4P35212 333 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 THBS2P35442 1172 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 MECP2P51608 486 aaKnown RBP7.99□□□□□ -1.13
CCDC39-207ENST00000495817 STAT4Q14765 748 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 CRY1Q16526 586 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 TTLL7Q6ZT98 887 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 B4GALT6Q9UBX8 382 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 SRPK3Q9UPE1 567 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 COQ6Q9Y2Z9 468 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 WASHC2CQ9Y4E1 1318 aa7.99□□□□□ -1.13
CCDC39-207ENST00000495817 TRAF5O00463 557 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 TRIM13O60858 407 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 CYP7B1O75881 506 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 FAHP16930 419 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 GUCY2FP51841 1108 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 DSG1Q02413 1049 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 SART3Q15020 963 aaKnown RBP7.98□□□□□ -1.13
CCDC39-207ENST00000495817 ARHGAP44Q17R89 818 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 FBLN7Q53RD9 439 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 ARHGAP36Q6ZRI8 547 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 OVCH1Q7RTY7 1134 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 MARCH10Q8NA82 808 aaPredicted RBP7.98□□□□□ -1.13
CCDC39-207ENST00000495817 CHST14Q8NCH0 376 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 CLEC4DQ8WXI8 215 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 KCNC2Q96PR1 638 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 APOBEC2Q9Y235 224 aaKnown RBP7.98□□□□□ -1.13
CCDC39-207ENST00000495817 ZKSCAN5Q9Y2L8 839 aa7.98□□□□□ -1.13
CCDC39-207ENST00000495817 ZNF561-AS1K7EIQ3 104 aa7.97□□□□□ -1.13
CCDC39-207ENST00000495817 NEMP1O14524 444 aa7.97□□□□□ -1.13
CCDC39-207ENST00000495817 MARCH6O60337 910 aa7.97□□□□□ -1.13
CCDC39-207ENST00000495817 SASH1O94885 1247 aa7.97□□□□□ -1.13
CCDC39-207ENST00000495817 PYGMP11217 842 aa7.97□□□□□ -1.13
CCDC39-207ENST00000495817 PDE6AP16499 860 aa7.97□□□□□ -1.13
CCDC39-207ENST00000495817 RPL13P26373 211 aaKnown RBP7.97□□□□□ -1.13
CCDC39-207ENST00000495817 LACTBP83111 547 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-207ENST00000495817 PAN2Q504Q3 1202 aaKnown RBP7.97□□□□□ -1.13
CCDC39-207ENST00000495817 SPATS2Q86XZ4 545 aaKnown RBP7.97□□□□□ -1.13
CCDC39-207ENST00000495817 TP53I13Q8NBR0 393 aaPredicted RBP7.97□□□□□ -1.13
CCDC39-207ENST00000495817 SMC1BQ8NDV3 1235 aa7.97□□□□□ -1.13
CCDC39-207ENST00000495817 CLIC6Q96NY7 704 aa7.97□□□□□ -1.13
CCDC39-207ENST00000495817 SLC5A4Q9NY91 659 aa7.97□□□□□ -1.13
CCDC39-207ENST00000495817 CBLCQ9ULV8 474 aa7.97□□□□□ -1.13
CCDC39-207ENST00000495817 GAS7O60861 476 aa7.96□□□□□ -1.14
CCDC39-207ENST00000495817 DNM2P50570 870 aa7.96□□□□□ -1.14
CCDC39-207ENST00000495817 SMAD4Q13485 552 aaKnown RBP7.96□□□□□ -1.14
CCDC39-207ENST00000495817 VASNQ6EMK4 673 aa7.96□□□□□ -1.14
CCDC39-207ENST00000495817 EP400NLQ6ZTU2 488 aa7.96□□□□□ -1.14
CCDC39-207ENST00000495817 CARFQ8N187 725 aa7.96□□□□□ -1.14
CCDC39-207ENST00000495817 SH3RF2Q8TEC5 729 aa7.96□□□□□ -1.14
CCDC39-207ENST00000495817 ZNF526Q8TF50 670 aaPredicted RBP7.96□□□□□ -1.14
CCDC39-207ENST00000495817 PUS7LQ9H0K6 701 aaKnown RBP7.96□□□□□ -1.14
CCDC39-207ENST00000495817 SPATA6Q9NWH7 488 aaPredicted RBP7.96□□□□□ -1.14
CCDC39-207ENST00000495817 TELO2Q9Y4R8 837 aa7.96□□□□□ -1.14
CCDC39-207ENST00000495817 TCRBV5S4A2TA0A5A2 114 aa7.95□□□□□ -1.14
CCDC39-207ENST00000495817 ZNF891A8MT65 544 aaPredicted RBP7.95□□□□□ -1.14
CCDC39-207ENST00000495817 MAN2B1O00754 1011 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms