RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 RPLP2P05387 115 aaKnown RBP10.09□□□□□ -0.79
SORT1-208ENST00000495777 GNAQP50148 359 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 SP4Q02446 784 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 CAMK1Q14012 370 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 SMAD2Q15796 467 aaKnown RBP10.09□□□□□ -0.79
SORT1-208ENST00000495777 GRIK4Q16099 956 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 TSHZ1Q6ZSZ6 1077 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 RSPH3Q86UC2 560 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 SRBD1Q8N5C6 995 aaKnown RBP10.09□□□□□ -0.79
SORT1-208ENST00000495777 CTCFLQ8NI51 663 aaPredicted RBP10.09□□□□□ -0.79
SORT1-208ENST00000495777 LINC01599Q8WXQ3 324 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 PIBF1Q8WXW3 757 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 SEPT1Q8WYJ6 367 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 PLVAPQ9BX97 442 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 CLDND1Q9NY35 253 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 SEC63Q9UGP8 760 aaKnown RBP10.09□□□□□ -0.79
SORT1-208ENST00000495777 TUBE1Q9UJT0 475 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 SQORQ9Y6N5 450 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 MYH6P13533 1939 aa10.09□□□□□ -0.79
SORT1-208ENST00000495777 MYH7BA7E2Y1 1941 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 MAFGO15525 162 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 PLEKHA8P1O95397 391 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 MRPS6P82932 125 aaKnown RBP10.08□□□□□ -0.8
SORT1-208ENST00000495777 DLX2Q07687 328 aaPredicted RBP10.08□□□□□ -0.8
SORT1-208ENST00000495777 MTMR1Q13613 665 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 DNAJB3Q8WWF6 145 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 P2RX5Q93086 422 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 PCYT2Q99447 389 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 MYL10Q9BUA6 226 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 BACH2Q9BYV9 841 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 KCNH6Q9H252 994 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 SMARCAD1Q9H4L7 1026 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 PSTPIP2Q9H939 334 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 AGO3Q9H9G7 860 aaKnown RBP10.08□□□□□ -0.8
SORT1-208ENST00000495777 JADE2Q9NQC1 790 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 CDY2AQ9Y6F7 541 aa10.08□□□□□ -0.8
SORT1-208ENST00000495777 RRN3P2A6NIE6 340 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 SH2B2O14492 632 aaPredicted RBP10.07□□□□□ -0.8
SORT1-208ENST00000495777 MBTPS2O43462 519 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 PRC1O43663 620 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 TBX10O75333 385 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 MARK3P27448 753 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 IRS1P35568 1242 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 LIFRP42702 1097 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 ANAPC15P60006 121 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 SMAD4Q13485 552 aaKnown RBP10.07□□□□□ -0.8
SORT1-208ENST00000495777 COL9A3Q14050 684 aaPredicted RBP10.07□□□□□ -0.8
SORT1-208ENST00000495777 BTG3Q14201 252 aaPredicted RBP10.07□□□□□ -0.8
SORT1-208ENST00000495777 KRT32Q14532 448 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 NAALADL2Q58DX5 795 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 HERC4Q5GLZ8 1057 aaPredicted RBP10.07□□□□□ -0.8
SORT1-208ENST00000495777 RTN4RL1Q86UN2 441 aaPredicted RBP10.07□□□□□ -0.8
SORT1-208ENST00000495777 TEX2Q8IWB9 1127 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 CMTR2Q8IYT2 770 aaKnown RBP10.07□□□□□ -0.8
SORT1-208ENST00000495777 TMTC2Q8N394 836 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 GLG1Q92896 1179 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 TMEM87BQ96K49 555 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 MSLNLQ96KJ4 702 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 POP1Q99575 1024 aaKnown RBP10.07□□□□□ -0.8
SORT1-208ENST00000495777 FTHL17Q9BXU8 183 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 UPF3BQ9BZI7 483 aaKnown RBP10.07□□□□□ -0.8
SORT1-208ENST00000495777 PLAGL2Q9UPG8 496 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 RBM8AQ9Y5S9 174 aaKnown RBP10.07□□□□□ -0.8
SORT1-208ENST00000495777 MRPL42Q9Y6G3 142 aaKnown RBP10.07□□□□□ -0.8
SORT1-208ENST00000495777 IGSF9BQ9UPX0 1349 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 KDM3AQ9Y4C1 1321 aa10.07□□□□□ -0.8
SORT1-208ENST00000495777 RALGAPA2Q2PPJ7 1873 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 EYA4O95677 639 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 CALM1P0DP23 149 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 CALM2P0DP24 149 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 CALM3P0DP25 149 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 INSRRP14616 1297 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 DNAJB1P25685 340 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 CD52P31358 61 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 MCM5P33992 734 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 ADAM15Q13444 863 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 UBE2SQ16763 222 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 CSPP1Q1MSJ5 1256 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 IER5Q5VY09 327 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 FAM43BQ6ZT52 329 aaPredicted RBP10.06□□□□□ -0.8
SORT1-208ENST00000495777 EP400NLQ6ZTU2 488 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 NPAS4Q8IUM7 802 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 CMTR1Q8N1G2 835 aaKnown RBP10.06□□□□□ -0.8
SORT1-208ENST00000495777 ZBTB10Q96DT7 871 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 LSG1Q9H089 658 aaKnown RBP10.06□□□□□ -0.8
SORT1-208ENST00000495777 JPH1Q9HDC5 661 aaPredicted RBP10.06□□□□□ -0.8
SORT1-208ENST00000495777 PCDHA6Q9UN73 950 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 PCDHA8Q9Y5H6 950 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 PCDHA2Q9Y5H9 948 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 BAZ2BQ9UIF8 2168 aaKnown RBP10.06□□□□□ -0.8
SORT1-208ENST00000495777 NFASCO94856 1347 aa10.06□□□□□ -0.8
SORT1-208ENST00000495777 SPDYE3A6NKU9 549 aa10.05□□□□□ -0.8
SORT1-208ENST00000495777 LINC01565O15544 149 aa10.05□□□□□ -0.8
SORT1-208ENST00000495777 ATG7O95352 703 aa10.05□□□□□ -0.8
SORT1-208ENST00000495777 ITGB1P05556 798 aa10.05□□□□□ -0.8
SORT1-208ENST00000495777 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
SORT1-208ENST00000495777 HSPA4P34932 840 aa10.05□□□□□ -0.8
SORT1-208ENST00000495777 GTF2F1P35269 517 aaKnown RBP eCLIP10.05□□□□□ -0.8
SORT1-208ENST00000495777 PLCB4Q15147 1175 aa10.05□□□□□ -0.8
SORT1-208ENST00000495777 TSGA10IPQ3SY00 556 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms