RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 BARX2Q9UMQ3 279 aaPredicted RBP10.88□□□□□ -0.67
GTF3C2-213ENST00000495298 CDY2AQ9Y6F7 541 aa10.88□□□□□ -0.67
GTF3C2-213ENST00000495298 NRCAMQ92823 1304 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 FNDC1Q4ZHG4 1894 aaPredicted RBP10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 PNMA6FA0A0J9YX94 578 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 GSTTP1A0A1W2PQM5 241 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 MBLAC1A4D2B0 266 aaPredicted RBP10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 TMEM221A6NGB7 291 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 M0R296 226 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 NCK2O43639 380 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 EYA4O95677 639 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 GNAT1P11488 350 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 KCNA2P16389 499 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 CD52P31358 61 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 NDUFV1P49821 464 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 NT5C2P49902 561 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 TMEM62Q0P6H9 643 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 TROAPQ12815 778 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 PPFIA1Q13136 1202 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 GRIK4Q16099 956 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 RBM23Q86U06 439 aaKnown RBP10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 SMC5Q8IY18 1101 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 SAMD3Q8N6K7 520 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 KLHL23Q8NBE8 558 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 SMRP1Q8NCR6 262 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 VN1R2Q8NFZ6 395 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 SPPL3Q8TCT6 385 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 MFSD14AQ96MC6 490 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 UPF3BQ9BZI7 483 aaKnown RBP10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 OSBPL3Q9H4L5 887 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 FAM86C1Q9NVL1 165 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 PKD2L1Q9P0L9 805 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 HCSTQ9UBK5 93 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 TUBE1Q9UJT0 475 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 ZNF215Q9UL58 517 aaPredicted RBP10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 SPTBN4Q9H254 2564 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 VPS13AQ96RL7 3174 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 PLXNA3P51805 1871 aa10.87□□□□□ -0.67
GTF3C2-213ENST00000495298 LOC730098B7Z3J9 87 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 MEIS2O14770 477 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 IGHDP01880 384 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 NRIP1P48552 1158 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 VCPP55072 806 aaKnown RBP10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 IGBP1P78318 339 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 COL9A3Q14050 684 aaPredicted RBP10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 TSHZ1Q6ZSZ6 1077 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 TRIM67Q6ZTA4 783 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 POF1BQ8WVV4 589 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 PBXIP1Q96AQ6 731 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 PCYT2Q99447 389 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 POP1Q99575 1024 aaKnown RBP10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 MYL10Q9BUA6 226 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 FAM49AQ9H0Q0 323 aaPredicted RBP10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 CNNM2Q9H8M5 875 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 RWDD3Q9Y3V2 267 aa10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 USP15Q9Y4E8 981 aaPredicted RBP10.86□□□□□ -0.67
GTF3C2-213ENST00000495298 DCHS1Q96JQ0 3298 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 PER2O15055 1255 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 STAM2O75886 525 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 CYP21A2P08686 494 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 ITGB5P18084 799 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 IBSPP21815 317 aaPredicted RBP10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 ANTXR2P58335 489 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 MRPS6P82932 125 aaKnown RBP10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 ZXDAP98168 799 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 PTH1RQ03431 593 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 COASYQ13057 564 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 CBX2Q14781 532 aaPredicted RBP10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 PCNX4Q63HM2 1172 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 TAF2Q6P1X5 1199 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 BMP8AQ7Z5Y6 402 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 CHD1LQ86WJ1 897 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 EFHBQ8N7U6 833 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 TRAPPC12Q8WVT3 735 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 P2RX5Q93086 422 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 SENP7Q9BQF6 1050 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 PLVAPQ9BX97 442 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 TMX1Q9H3N1 280 aa10.85□□□□□ -0.67
GTF3C2-213ENST00000495298 PTPRZ1P23471 2315 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 IFIT3O14879 490 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 MGEA5O60502 916 aa10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 PPFIA3O75145 1194 aa10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 PDGFBP01127 241 aaPredicted RBP10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 NUCB1Q02818 461 aa10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 UBE2SQ16763 222 aa10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 TMEM266Q2M3C6 531 aa10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 CMTR2Q8IYT2 770 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 CMTR1Q8N1G2 835 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 SMARCC2Q8TAQ2 1214 aa10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 ASIC4Q96FT7 647 aa10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 RPGRIP1Q96KN7 1286 aa10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 CDH22Q9UJ99 828 aa10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 RIF1Q5UIP0 2472 aaKnown RBP10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 EVPLQ92817 2033 aa10.84□□□□□ -0.67
GTF3C2-213ENST00000495298 hCG_1642624A0A1W2PR95 340 aa10.83□□□□□ -0.68
GTF3C2-213ENST00000495298 PIK3CDO00329 1044 aa10.83□□□□□ -0.68
GTF3C2-213ENST00000495298 PLEKHA8P1O95397 391 aa10.83□□□□□ -0.68
GTF3C2-213ENST00000495298 INSRRP14616 1297 aa10.83□□□□□ -0.68
GTF3C2-213ENST00000495298 GSPT1P15170 499 aaKnown RBP10.83□□□□□ -0.68
GTF3C2-213ENST00000495298 PTPN5P54829 565 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms