RNA–Protein interactions for RNA: ENST00000495178.1

ATXN1-209, Transcript of ataxin 1, humanhuman

TSL 1 (best)

Gene ATXN1, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-209ENST00000495178 COL6A1P12109 1028 aa4.81□□□□□ -1.64
ATXN1-209ENST00000495178 DGCR2P98153 550 aa4.81□□□□□ -1.64
ATXN1-209ENST00000495178 RASGRF1Q13972 1273 aa4.81□□□□□ -1.64
ATXN1-209ENST00000495178 KIZQ2M2Z5 673 aa4.81□□□□□ -1.64
ATXN1-209ENST00000495178 HABP4Q5JVS0 413 aaKnown RBP4.81□□□□□ -1.64
ATXN1-209ENST00000495178 AGBL4Q5VU57 503 aa4.81□□□□□ -1.64
ATXN1-209ENST00000495178 LBX2Q6XYB7 198 aa4.81□□□□□ -1.64
ATXN1-209ENST00000495178 RALYLQ86SE5 291 aaKnown RBP4.81□□□□□ -1.64
ATXN1-209ENST00000495178 TRIM48Q8IWZ4 208 aa4.81□□□□□ -1.64
ATXN1-209ENST00000495178 GIMAP8Q8ND71 665 aaPredicted RBP4.81□□□□□ -1.64
ATXN1-209ENST00000495178 VOPP1Q96AW1 172 aa4.81□□□□□ -1.64
ATXN1-209ENST00000495178 NAF1Q96HR8 494 aaKnown RBP4.81□□□□□ -1.64
ATXN1-209ENST00000495178 SPATA9Q9BWV2 254 aa4.81□□□□□ -1.64
ATXN1-209ENST00000495178 ASH2LQ9UBL3 628 aa4.81□□□□□ -1.64
ATXN1-209ENST00000495178 U2SURPO15042 1029 aaKnown RBP4.8□□□□□ -1.64
ATXN1-209ENST00000495178 PDPK1O15530 556 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 ATP2B1P20020 1258 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 GRK2P25098 689 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 GRK3P35626 688 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 ATXN1P54253 815 aaKnown RBP4.8□□□□□ -1.64
ATXN1-209ENST00000495178 GPR85P60893 370 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 IFRD2Q12894 506 aaPredicted RBP4.8□□□□□ -1.64
ATXN1-209ENST00000495178 LRCH2Q5VUJ6 765 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 DPY19L2P1Q6NXN4 242 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 KCNT2Q6UVM3 1135 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 OTOP3Q7RTS5 596 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 LDLRAD3Q86YD5 345 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 SCUBE1Q8IWY4 988 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 IFNL3Q8IZI9 196 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 NUDT10Q8NFP7 164 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 UHMK1Q8TAS1 419 aaKnown RBP4.8□□□□□ -1.64
ATXN1-209ENST00000495178 NUDT11Q96G61 164 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 JAM3Q9BX67 310 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 PPARGC1AQ9UBK2 798 aaKnown RBP4.8□□□□□ -1.64
ATXN1-209ENST00000495178 NUB1Q9Y5A7 615 aa4.8□□□□□ -1.64
ATXN1-209ENST00000495178 ADCY3O60266 1144 aa4.79□□□□□ -1.64
ATXN1-209ENST00000495178 KLHL18O94889 574 aa4.79□□□□□ -1.64
ATXN1-209ENST00000495178 LMO1P25800 156 aa4.79□□□□□ -1.64
ATXN1-209ENST00000495178 YOD1Q5VVQ6 348 aaPredicted RBP4.79□□□□□ -1.64
ATXN1-209ENST00000495178 Q6ZUG5 572 aa4.79□□□□□ -1.64
ATXN1-209ENST00000495178 SPATC1Q76KD6 591 aa4.79□□□□□ -1.64
ATXN1-209ENST00000495178 LRP10Q7Z4F1 713 aa4.79□□□□□ -1.64
ATXN1-209ENST00000495178 PIP4K2CQ8TBX8 421 aa4.79□□□□□ -1.64
ATXN1-209ENST00000495178 LRRC37BQ96QE4 947 aa4.79□□□□□ -1.64
ATXN1-209ENST00000495178 HIRIP3Q9BW71 556 aaPredicted RBP4.79□□□□□ -1.64
ATXN1-209ENST00000495178 TANGO6Q9C0B7 1094 aa4.79□□□□□ -1.64
ATXN1-209ENST00000495178 SIRPGQ9P1W8 387 aa4.79□□□□□ -1.64
ATXN1-209ENST00000495178 WASF3Q9UPY6 502 aa4.79□□□□□ -1.64
ATXN1-209ENST00000495178 WNT9AO14904 365 aa4.78□□□□□ -1.64
ATXN1-209ENST00000495178 EPHA5P54756 1037 aa4.78□□□□□ -1.64
ATXN1-209ENST00000495178 RBL2Q08999 1139 aa4.78□□□□□ -1.64
ATXN1-209ENST00000495178 SPIRE1Q08AE8 756 aa4.78□□□□□ -1.64
ATXN1-209ENST00000495178 SERINC3Q13530 473 aa4.78□□□□□ -1.64
ATXN1-209ENST00000495178 LONRF2Q1L5Z9 754 aa4.78□□□□□ -1.64
ATXN1-209ENST00000495178 MAMDC2Q7Z304 686 aaPredicted RBP4.78□□□□□ -1.64
ATXN1-209ENST00000495178 TAX1BP1Q86VP1 789 aa4.78□□□□□ -1.64
ATXN1-209ENST00000495178 C1orf210Q8IVY1 113 aa4.78□□□□□ -1.64
ATXN1-209ENST00000495178 ZBTB38Q8NAP3 1195 aaPredicted RBP4.78□□□□□ -1.64
ATXN1-209ENST00000495178 CACTINQ8WUQ7 758 aaKnown RBP4.78□□□□□ -1.64
ATXN1-209ENST00000495178 FAM47E-STBD1D6RA91 191 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 SOD2P04179 222 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 CHGBP05060 677 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 ADH4P08319 380 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 C1SP09871 688 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 GNAT1P11488 350 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 ACO1P21399 889 aaKnown RBP4.77□□□□□ -1.65
ATXN1-209ENST00000495178 MTERF2Q49AM1 385 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 Q6ZSN1 163 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 MRGPRGQ86SM5 289 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 PROSER1Q86XN7 944 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 IFNL2Q8IZJ0 200 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 FUKQ8N0W3 1084 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 CLEC4DQ8WXI8 215 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 PTPRN2Q92932 1015 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 NEIL1Q96FI4 390 aaPredicted RBP4.77□□□□□ -1.65
ATXN1-209ENST00000495178 AJUBAQ96IF1 538 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 AGAP2Q99490 1192 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 ALG1Q9BT22 464 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 ASXL2Q76L83 1435 aa4.77□□□□□ -1.65
ATXN1-209ENST00000495178 AQP7O14520 342 aa4.76□□□□□ -1.65
ATXN1-209ENST00000495178 SLC27A2O14975 620 aa4.76□□□□□ -1.65
ATXN1-209ENST00000495178 FAHP16930 419 aa4.76□□□□□ -1.65
ATXN1-209ENST00000495178 CSF2RBP32927 897 aa4.76□□□□□ -1.65
ATXN1-209ENST00000495178 SUMO1P63165 101 aaKnown RBP4.76□□□□□ -1.65
ATXN1-209ENST00000495178 SSRP1Q08945 709 aaKnown RBP4.76□□□□□ -1.65
ATXN1-209ENST00000495178 TUSC3Q13454 348 aa4.76□□□□□ -1.65
ATXN1-209ENST00000495178 PAN2Q504Q3 1202 aaKnown RBP4.76□□□□□ -1.65
ATXN1-209ENST00000495178 ZC3H12BQ5HYM0 836 aaKnown RBP4.76□□□□□ -1.65
ATXN1-209ENST00000495178 PCSK4Q6UW60 755 aa4.76□□□□□ -1.65
ATXN1-209ENST00000495178 TMC5Q6UXY8 1006 aa4.76□□□□□ -1.65
ATXN1-209ENST00000495178 DTX3Q8N9I9 347 aa4.76□□□□□ -1.65
ATXN1-209ENST00000495178 LARP4BQ92615 738 aaKnown RBP4.76□□□□□ -1.65
ATXN1-209ENST00000495178 PLEKHG4BQ96PX9 1271 aa4.76□□□□□ -1.65
ATXN1-209ENST00000495178 DSEQ9UL01 958 aa4.76□□□□□ -1.65
ATXN1-209ENST00000495178 DMRT1Q9Y5R6 373 aa4.76□□□□□ -1.65
ATXN1-209ENST00000495178 TRBV23-1A0A0A0MS06 115 aa4.75□□□□□ -1.65
ATXN1-209ENST00000495178 BLACEA4D250 179 aa4.75□□□□□ -1.65
ATXN1-209ENST00000495178 NKRFO15226 690 aaKnown RBP eCLIP4.75□□□□□ -1.65
ATXN1-209ENST00000495178 RAD17O75943 681 aa4.75□□□□□ -1.65
ATXN1-209ENST00000495178 C6orf222P0C671 652 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms