RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PCDHAC2Q9Y5I4 1007 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 KIAA0100Q14667 2235 aaKnown RBP6.55□□□□□ -1.36
PTCD3-219ENST00000494323 PITPNM2Q9BZ72 1349 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 TLDC2A0PJX2 215 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 F8W031 263 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-219ENST00000494323 RGS13O14921 159 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 FKTNO75072 461 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 TAF5LO75529 589 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 IGHMBP2P38935 993 aaKnown RBP6.54□□□□□ -1.36
PTCD3-219ENST00000494323 NEXNQ0ZGT2 675 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 RUFY4Q6ZNE9 571 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 ARMC9Q7Z3E5 817 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 DTX1Q86Y01 620 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 CELF2-AS1Q8N7Q2 184 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 TSR2Q969E8 191 aaKnown RBP6.54□□□□□ -1.36
PTCD3-219ENST00000494323 COA1Q9GZY4 146 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 SIRPGQ9P1W8 387 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 MSRB2Q9Y3D2 182 aa6.54□□□□□ -1.36
PTCD3-219ENST00000494323 ZNF804BA4D1E1 1349 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 GBP1P32455 592 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 KCNJ4P48050 445 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 GP2P55259 537 aaKnown RBP6.53□□□□□ -1.36
PTCD3-219ENST00000494323 CALD1Q05682 793 aaKnown RBP6.53□□□□□ -1.36
PTCD3-219ENST00000494323 CHRNDQ07001 517 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 SREBF2Q12772 1141 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 CDK5R2Q13319 367 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 DLGAP5Q15398 846 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 PPP2R5EQ16537 467 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 LETMD1Q6P1Q0 360 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 FBXO46Q6PJ61 603 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-219ENST00000494323 TTC6Q86TZ1 520 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 CLMNQ96JQ2 1002 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 DHRS1Q96LJ7 313 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 SLC9A7Q96T83 725 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 MPHOSPH8Q99549 860 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 KIF2CQ99661 725 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 MIPEPQ99797 713 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 STK31Q9BXU1 1019 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 DEFB129Q9H1M3 183 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 CD209Q9NNX6 404 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 SNTG2Q9NY99 539 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 ACTR10Q9NZ32 417 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 JAG2Q9Y219 1238 aa6.53□□□□□ -1.36
PTCD3-219ENST00000494323 A0A1W2PQH9 124 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 CLRN2A0PK11 232 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 FAM221BA6H8Z2 402 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 PLIN1O60240 522 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 ACRP10323 421 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 ETV3P41162 512 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 RBM5P52756 815 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTCD3-219ENST00000494323 CHMP4BP1P59074 171 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 CYP27A1Q02318 531 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 GCKRQ14397 625 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 CCDC184Q52MB2 194 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 SDE2Q6IQ49 451 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 UNC5AQ6ZN44 842 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 ZAR1Q86SH2 424 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 CERS5Q8N5B7 392 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 TOP6BLQ8N6T0 577 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 ZBED3Q96IU2 234 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-219ENST00000494323 PRMT6Q96LA8 375 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-219ENST00000494323 DUSP23Q9BVJ7 150 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 CHMP4AQ9BY43 222 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 TRIM55Q9BYV6 548 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 ANKRD2Q9GZV1 360 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTCD3-219ENST00000494323 PRKRIP1Q9H875 184 aaPredicted RBP6.52□□□□□ -1.37
PTCD3-219ENST00000494323 CEP131Q9UPN4 1083 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 TRIM17Q9Y577 477 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 MED23Q9ULK4 1368 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 PSME4Q14997 1843 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 SPEF2Q9C093 1822 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 PAPPA2Q9BXP8 1791 aa6.52□□□□□ -1.37
PTCD3-219ENST00000494323 AOX1Q06278 1338 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 MYO3BQ8WXR4 1341 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 IGF2BP3O00425 579 aaKnown RBP eCLIP6.51□□□□□ -1.37
PTCD3-219ENST00000494323 USP2O75604 605 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-219ENST00000494323 SLITRK5O94991 958 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 WNT11O96014 354 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 CSF1RP07333 972 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 FOSL1P15407 271 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 POLR2BP30876 1174 aaKnown RBP6.51□□□□□ -1.37
PTCD3-219ENST00000494323 IRAK1P51617 712 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 INHBEP58166 350 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 DDR2Q16832 855 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 TWISTNBQ3B726 338 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-219ENST00000494323 CFAP100Q494V2 611 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 NBPF12Q5TAG4 269 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-219ENST00000494323 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 OGFOD3Q6PK18 319 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 APOBEC3FQ8IUX4 373 aaKnown RBP6.51□□□□□ -1.37
PTCD3-219ENST00000494323 DNAJB8Q8NHS0 232 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 BAHD1Q8TBE0 780 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-219ENST00000494323 GATA6Q92908 595 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 DEPDC7Q96QD5 511 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 TNKS2Q9H2K2 1166 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 VEZTQ9HBM0 779 aa6.51□□□□□ -1.37
PTCD3-219ENST00000494323 MRPL42Q9Y6G3 142 aaKnown RBP6.51□□□□□ -1.37
PTCD3-219ENST00000494323 ZNF609O15014 1411 aa6.5□□□□□ -1.37
PTCD3-219ENST00000494323 MYH3P11055 1940 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms