RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 KIAA1024Q9UPX6 916 aa12.77□□□□□ -0.37
MCF2L-231ENST00000494043 TELO2Q9Y4R8 837 aa12.77□□□□□ -0.37
MCF2L-231ENST00000494043 PCDHA10Q9Y5I2 948 aa12.77□□□□□ -0.37
MCF2L-231ENST00000494043 DOCK5Q9H7D0 1870 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-231ENST00000494043 NKRFO15226 690 aaKnown RBP eCLIP12.76□□□□□ -0.37
MCF2L-231ENST00000494043 ATG7O95352 703 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 GH1P01241 217 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 SMPD1P17405 629 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 QARSP47897 775 aaKnown RBP12.76□□□□□ -0.37
MCF2L-231ENST00000494043 PRMT2P55345 433 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 LAMC2Q13753 1193 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 DUSP28Q4G0W2 176 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 RBM43Q6ZSC3 357 aaKnown RBP12.76□□□□□ -0.37
MCF2L-231ENST00000494043 TPH2Q8IWU9 490 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 GRAMD1CQ8IYS0 662 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 LARP4BQ92615 738 aaKnown RBP12.76□□□□□ -0.37
MCF2L-231ENST00000494043 EMID1Q96A84 441 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-231ENST00000494043 PAGE5Q96GU1 130 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 SPATA33Q96N06 139 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 ZSWIM4Q9H7M6 989 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 KBTBD4Q9NVX7 518 aa12.76□□□□□ -0.37
MCF2L-231ENST00000494043 WRAP73Q9P2S5 460 aaPredicted RBP12.76□□□□□ -0.37
MCF2L-231ENST00000494043 HOOK1Q9UJC3 728 aaKnown RBP12.76□□□□□ -0.37
MCF2L-231ENST00000494043 GSTTP1A0A1W2PQM5 241 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 FOXN1O15353 648 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 ADCY6O43306 1168 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 LETM1O95202 739 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-231ENST00000494043 LYPLA2O95372 231 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 CYBAP13498 195 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 PSMC5P62195 406 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 MDM2Q00987 491 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-231ENST00000494043 TNFAIP2Q03169 654 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 POSTNQ15063 836 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 UGCGQ16739 394 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 GJC2Q5T442 439 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-231ENST00000494043 CCDC60Q8IWA6 550 aaPredicted RBP12.75□□□□□ -0.37
MCF2L-231ENST00000494043 CKAP2LQ8IYA6 745 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 TRPV1Q8NER1 839 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 RAET1EQ8TD07 263 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 ATP6V0A1Q93050 837 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 GPR20Q99678 358 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 MTRQ99707 1265 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 ANP32EQ9BTT0 268 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 IGSF9BQ9UPX0 1349 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 DNM3Q9UQ16 869 aa12.75□□□□□ -0.37
MCF2L-231ENST00000494043 HTTP42858 3142 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 IGKV6D-21A0A0A0MT36 114 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 SYCE3A1L190 88 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 E9PMD0 336 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 NOP56O00567 594 aaKnown RBP12.74□□□□□ -0.37
MCF2L-231ENST00000494043 BACH1O14867 736 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 GTPBP6O43824 516 aaPredicted RBP12.74□□□□□ -0.37
MCF2L-231ENST00000494043 ADCY3O60266 1144 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 DKC1O60832 514 aaKnown RBP eCLIP12.74□□□□□ -0.372e-6■■■■■ 40.8
MCF2L-231ENST00000494043 EYA4O95677 639 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 HMGCRP04035 888 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 PRR29P0C7W0 189 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 PLA2G4BP0C869 781 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 ELNP15502 786 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 KCNA4P22459 653 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 PTGS1P23219 599 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 AFMP43652 599 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 PSMC6P62333 389 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 PNOCQ13519 176 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 MCM6Q14566 821 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 HSDL1Q3SXM5 330 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 SWSAP1Q6NVH7 229 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 SV2BQ7L1I2 683 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 C4orf19Q8IY42 314 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 PPTC7Q8NI37 304 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 PXYLP1Q8TE99 480 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 STAMQ92783 540 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 NACC1Q96RE7 527 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 GABBR1Q9UBS5 961 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 FAM184BQ9ULE4 1060 aa12.74□□□□□ -0.37
MCF2L-231ENST00000494043 GNEQ9Y223 722 aaKnown RBP12.74□□□□□ -0.37
MCF2L-231ENST00000494043 EMSYQ7Z589 1322 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 A0A087WWV3 80 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-231ENST00000494043 LGR5O75473 907 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 MYL1P05976 194 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 AKR1A1P14550 325 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 TCF7P36402 384 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-231ENST00000494043 AMPD3Q01432 767 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 CACNB2Q08289 660 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-231ENST00000494043 DPYDQ12882 1025 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 TRIM32Q13049 653 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 FAM160B1Q5W0V3 765 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 OR6J1Q8NGC5 347 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 AFAP1L1Q8TED9 768 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 PIGOQ8TEQ8 1089 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 ERCC4Q92889 916 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-231ENST00000494043 PCYT2Q99447 389 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 ZNF302Q9NR11 478 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 KIAA1468Q9P260 1216 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 TRIM17Q9Y577 477 aa12.73□□□□□ -0.37
MCF2L-231ENST00000494043 MAFBQ9Y5Q3 323 aaPredicted RBP12.73□□□□□ -0.37
MCF2L-231ENST00000494043 ZBTB39O15060 712 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms