RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 F2P00734 622 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 CYP3A4P08684 503 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 CYP2C9P11712 490 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 KRT2P35908 639 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 TCF7P36402 384 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 CCL23P55773 120 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 GUCY1B3Q02153 619 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 INF2Q27J81 1249 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 NFRKBQ6P4R8 1299 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 NIPA1Q7RTP0 329 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 SEPT1Q8WYJ6 367 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 KAT2BQ92831 832 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 GLG1Q92896 1179 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 ZNF577Q9BSK1 485 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 NOC4LQ9BVI4 516 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 WNT8AQ9H1J5 351 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 AGO4Q9HCK5 861 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 CD320Q9NPF0 282 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 HDAC6Q9UBN7 1215 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 SLC9A2Q9UBY0 812 aa11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 ZNF215Q9UL58 517 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC12-222ENST00000493792 H3BRB1 525 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 IPO5O00410 1097 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 MARK3P27448 753 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 MCM2P49736 904 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 HMGN5P82970 282 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 SETQ01105 290 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 PTPN11Q06124 597 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 ITGB3BPQ13352 177 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 GNL2Q13823 731 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 SAFBQ15424 915 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 NPY5RQ15761 445 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 PTGISQ16647 500 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 LETM2Q2VYF4 491 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 PPP2R2DQ66LE6 453 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 KRT40Q6A162 431 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 PIK3AP1Q6ZUJ8 805 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 MICALL1Q8N3F8 863 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 C8orf76Q96K31 380 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 LLPHQ9BRT6 129 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 C16orf70Q9BSU1 422 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 MTIF3Q9H2K0 278 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 TUT1Q9H6E5 874 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 AZI2Q9H6S1 392 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 HCN4Q9Y3Q4 1203 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 SLC4A7Q9Y6M7 1214 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 NFASCO94856 1347 aa11.8□□□□□ -0.52
TRAPPC12-222ENST00000493792 SCN10AQ9Y5Y9 1956 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 IGLV3-22A0A075B6J6 115 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 BACH1O14867 736 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 MARCH6O60337 910 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 ARHGEF15O94989 841 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 CD2BP2O95400 341 aaKnown RBP11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 TDP2O95551 362 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 MMP1P03956 469 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 HOXD8P13378 290 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 USP11P51784 963 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 ACTR2P61160 394 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 NR5A1Q13285 461 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 GDF6Q6KF10 455 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 ALYREFQ86V81 257 aaKnown RBP11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 DIS3L2Q8IYB7 885 aaKnown RBP11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 CRYGNQ8WXF5 182 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 TMX3Q96JJ7 454 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 COG5Q9UP83 839 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 SAMM50Q9Y512 469 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 MUC6Q6W4X9 2439 aa11.79□□□□□ -0.52
TRAPPC12-222ENST00000493792 GSTTP1A0A1W2PQM5 241 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 C17orf102A2RUQ5 167 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 BTBD18B2RXH4 712 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 PI4K2BG5E9Z4 385 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 M0R2N6 131 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 HAS3O00219 553 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 SMIM10L2AP0DMW4 78 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 SMIM10L2BP0DMW5 78 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 ATP2A2P16615 1042 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 CIITAP33076 1130 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 ZNF200P98182 395 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 SKIV2LQ15477 1246 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 NEK8Q86SG6 692 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 RPUSD2Q8IZ73 545 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 CCDC155Q8N6L0 562 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 SMARCAD1Q9H4L7 1026 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 CERS4Q9HA82 394 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 TBC1D22BQ9NU19 505 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 DDX25Q9UHL0 483 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 GTF2IRD1Q9UHL9 959 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 KIF3AQ9Y496 699 aa11.78□□□□□ -0.52
TRAPPC12-222ENST00000493792 FAM86C2PA6NEL3 165 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 FAM205CA6NFA0 338 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 MSH4O15457 936 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 CHMP2AO43633 222 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 CCNT1O60563 726 aaKnown RBP11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 LPXNO60711 386 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 GAS7O60861 476 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 CA3P07451 260 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 GNAT1P11488 350 aa11.77□□□□□ -0.53
TRAPPC12-222ENST00000493792 ATP2B1P20020 1258 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms