RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 KIF18BQ86Y91 864 aa6.35□□□□□ -1.39
ITGB1-216ENST00000493758 ZCCHC14Q8WYQ9 949 aaKnown RBP6.35□□□□□ -1.39
ITGB1-216ENST00000493758 YTHDC1Q96MU7 727 aaKnown RBP6.35□□□□□ -1.39
ITGB1-216ENST00000493758 KCND1Q9NSA2 647 aa6.35□□□□□ -1.39
ITGB1-216ENST00000493758 BTBD7Q9P203 1132 aa6.35□□□□□ -1.39
ITGB1-216ENST00000493758 A0A1B0GTL3 188 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 CBX4O00257 560 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 NOBOXO60393 691 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 INHBBP09529 407 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 BMP7P18075 431 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 KRT15P19012 456 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 KCNC1P48547 511 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 SEC23AQ15436 765 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 FSTL4Q6MZW2 842 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 TMC5Q6UXY8 1006 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 SPATA25Q9BR10 227 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 RIC8BQ9NVN3 520 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 SAMD15Q9P1V8 674 aa6.34□□□□□ -1.39
ITGB1-216ENST00000493758 TMA7Q9Y2S6 64 aaKnown RBP6.34□□□□□ -1.39
ITGB1-216ENST00000493758 TLDC2A0PJX2 215 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 OPA1O60313 960 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 KNG1P01042 644 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 ZBTB48P10074 688 aaPredicted RBP6.33□□□□□ -1.4
ITGB1-216ENST00000493758 FNTBP49356 437 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 GJA9P57773 515 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 PFKPQ01813 784 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 SMAD2Q15796 467 aaKnown RBP6.33□□□□□ -1.4
ITGB1-216ENST00000493758 VMACQ2NL98 169 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 TM4SF20Q53R12 229 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 DALRD3Q5D0E6 543 aaKnown RBP6.33□□□□□ -1.4
ITGB1-216ENST00000493758 PKN3Q6P5Z2 889 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 EP400NLQ6ZTU2 488 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 NIM1KQ8IY84 436 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 ADGRG2Q8IZP9 1017 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 MFSD3Q96ES6 412 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 TEPSINQ96N21 525 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 ZCCHC4Q9H5U6 513 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 RBPJLQ9UBG7 517 aa6.33□□□□□ -1.4
ITGB1-216ENST00000493758 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.32□□□□□ -1.4
ITGB1-216ENST00000493758 M0R2C6 588 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 HIP1RO75146 1068 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 PTGS1P23219 599 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 MLLT6P55198 1093 aaPredicted RBP6.32□□□□□ -1.4
ITGB1-216ENST00000493758 IRF9Q00978 393 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 STILQ15468 1287 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 ZFYVE27Q5T4F4 411 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 CC2D1AQ6P1N0 951 aaPredicted RBP6.32□□□□□ -1.4
ITGB1-216ENST00000493758 GIMAP6Q6P9H5 292 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 LRRTM3Q86VH5 581 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 PPM1KQ8N3J5 372 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 C2orf69Q8N8R5 385 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 MBD6Q96DN6 1003 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 ZSWIM3Q96MP5 696 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 ARHGAP20Q9P2F6 1191 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 B4GALT6Q9UBX8 382 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 ZFP69BQ9UJL9 534 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 ASB1Q9Y576 335 aa6.32□□□□□ -1.4
ITGB1-216ENST00000493758 A0A0G2JLL6 359 aaPredicted RBP6.31□□□□□ -1.4
ITGB1-216ENST00000493758 TRAF5O00463 557 aa6.31□□□□□ -1.4
ITGB1-216ENST00000493758 KLHL18O94889 574 aa6.31□□□□□ -1.4
ITGB1-216ENST00000493758 MPIG6BO95866 241 aa6.31□□□□□ -1.4
ITGB1-216ENST00000493758 JMJD7P0C870 316 aa6.31□□□□□ -1.4
ITGB1-216ENST00000493758 HOXA5P20719 270 aa6.31□□□□□ -1.4
ITGB1-216ENST00000493758 HSD3B2P26439 372 aa6.31□□□□□ -1.4
ITGB1-216ENST00000493758 TAF7LQ5H9L4 462 aa6.31□□□□□ -1.4
ITGB1-216ENST00000493758 CREB3L3Q68CJ9 461 aa6.31□□□□□ -1.4
ITGB1-216ENST00000493758 UBE2R2Q712K3 238 aaPredicted RBP6.31□□□□□ -1.4
ITGB1-216ENST00000493758 CXXC5Q7LFL8 322 aaKnown RBP6.31□□□□□ -1.4
ITGB1-216ENST00000493758 STK32CQ86UX6 486 aa6.31□□□□□ -1.4
ITGB1-216ENST00000493758 REXO1L1PQ8IX06 675 aa6.31□□□□□ -1.4
ITGB1-216ENST00000493758 CABP5Q9NP86 173 aa6.31□□□□□ -1.4
ITGB1-216ENST00000493758 PRAMEF25A6NGN4 478 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 OTOL1A6NHN0 477 aaPredicted RBP6.3□□□□□ -1.4
ITGB1-216ENST00000493758 RASSF10A6NK89 507 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 IL18BPO95998 194 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 IL13P35225 146 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 RGL3Q3MIN7 710 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 CATSPEREQ5SY80 951 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 PIK3R6Q5UE93 754 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 PRAMEF18Q5VWM3 479 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 CPZQ66K79 652 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 CDCA2Q69YH5 1023 aaPredicted RBP6.3□□□□□ -1.4
ITGB1-216ENST00000493758 KLHL36Q8N4N3 616 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 TXNDC5Q8NBS9 432 aaKnown RBP6.3□□□□□ -1.4
ITGB1-216ENST00000493758 SYT8Q8NBV8 401 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 ASB15Q8WXK1 588 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 DDX1Q92499 740 aaKnown RBP6.3□□□□□ -1.4
ITGB1-216ENST00000493758 LCORQ96JN0 433 aaPredicted RBP6.3□□□□□ -1.4
ITGB1-216ENST00000493758 L2HGDHQ9H9P8 463 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 INCENPQ9NQS7 918 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 ARHGAP28Q9P2N2 729 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 FTSJ1Q9UET6 329 aa6.3□□□□□ -1.4
ITGB1-216ENST00000493758 MROH6A6NGR9 719 aa6.29□□□□□ -1.4
ITGB1-216ENST00000493758 DDX3XO00571 662 aaKnown RBP eCLIP6.29□□□□□ -1.47e-13■■■■□ 24.7
ITGB1-216ENST00000493758 SCDO00767 359 aa6.29□□□□□ -1.4
ITGB1-216ENST00000493758 FOXP2O15409 715 aa6.29□□□□□ -1.4
ITGB1-216ENST00000493758 MMEP08473 750 aa6.29□□□□□ -1.4
ITGB1-216ENST00000493758 KIAA2012Q0VF49 1180 aa6.29□□□□□ -1.4
ITGB1-216ENST00000493758 NT5DC1Q5TFE4 455 aa6.29□□□□□ -1.4
ITGB1-216ENST00000493758 SDE2Q6IQ49 451 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms