RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 GTF2IRD1Q9UHL9 959 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 DOLKQ9UPQ8 538 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 PCDHB11Q9Y5F2 797 aa8.22□□□□□ -1.09
CAB39-206ENST00000493540 DCHS1Q96JQ0 3298 aa8.21□□□□□ -1.09
CAB39-206ENST00000493540 SPTBN4Q9H254 2564 aa8.21□□□□□ -1.09
CAB39-206ENST00000493540 PLXNA3P51805 1871 aa8.21□□□□□ -1.09
CAB39-206ENST00000493540 RANBP6O60518 1105 aaKnown RBP8.21□□□□□ -1.1
CAB39-206ENST00000493540 NBNO60934 754 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 PARNO95453 639 aaKnown RBP8.21□□□□□ -1.1
CAB39-206ENST00000493540 IKQ13123 557 aaPredicted RBP8.21□□□□□ -1.1
CAB39-206ENST00000493540 CCDC96Q2M329 555 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 MCMDC2Q4G0Z9 681 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 TMEM67Q5HYA8 995 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 GDF6Q6KF10 455 aaPredicted RBP8.21□□□□□ -1.1
CAB39-206ENST00000493540 SMC5Q8IY18 1101 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 WNT8BQ93098 351 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 NECAB3Q96P71 396 aaPredicted RBP8.21□□□□□ -1.1
CAB39-206ENST00000493540 ARID3AQ99856 593 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 PGPEP1Q9NXJ5 209 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 COG5Q9UP83 839 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 MYO10Q9HD67 2058 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 WDR87Q6ZQQ6 2873 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 ABCB11O95342 1321 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 FRMPD2Q68DX3 1309 aaPredicted RBP8.21□□□□□ -1.1
CAB39-206ENST00000493540 DMDP11532 3685 aa8.21□□□□□ -1.1
CAB39-206ENST00000493540 PTPDC1A2A3K4 754 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 LCHNA4D1U4 455 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 GJB5O95377 273 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 TXNP10599 105 aaKnown RBP8.2□□□□□ -1.1
CAB39-206ENST00000493540 ACTN1P12814 892 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 DEFB103AP81534 67 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 HTRA4P83105 476 aaPredicted RBP8.2□□□□□ -1.1
CAB39-206ENST00000493540 USP4Q13107 963 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 NMIQ13287 307 aaPredicted RBP8.2□□□□□ -1.1
CAB39-206ENST00000493540 GRB10Q13322 594 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 BFSP2Q13515 415 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 CDC37Q16543 378 aaPredicted RBP8.2□□□□□ -1.1
CAB39-206ENST00000493540 AAK1Q2M2I8 961 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 SLC35G1Q2M3R5 365 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 CNKSR3Q6P9H4 555 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 PLEKHM2Q8IWE5 1019 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 ENAHQ8N8S7 591 aaPredicted RBP8.2□□□□□ -1.1
CAB39-206ENST00000493540 PPTC7Q8NI37 304 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 SYTL5Q8TDW5 730 aaPredicted RBP8.2□□□□□ -1.1
CAB39-206ENST00000493540 VTI1AQ96AJ9 217 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 IWS1Q96ST2 819 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 RC3H2Q9HBD1 1191 aaKnown RBP8.2□□□□□ -1.1
CAB39-206ENST00000493540 TMPRSS4Q9NRS4 437 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 RAPGEFL1Q9UHV5 662 aa8.2□□□□□ -1.1
CAB39-206ENST00000493540 MAFBQ9Y5Q3 323 aaPredicted RBP8.2□□□□□ -1.1
CAB39-206ENST00000493540 ARID2Q68CP9 1835 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 C2orf16Q68DN1 1984 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 FANCMQ8IYD8 2048 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.19□□□□□ -1.1
CAB39-206ENST00000493540 RFXAPO00287 272 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 PPP1R11O60927 126 aaPredicted RBP8.19□□□□□ -1.1
CAB39-206ENST00000493540 GH1P01241 217 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 MYL3P08590 195 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 LINC00271P0C7V0 271 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 CKBP12277 381 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 SELPP16109 830 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 IGFBP4P22692 258 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 CALML3P27482 149 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 RRP1P56182 461 aaKnown RBP8.19□□□□□ -1.1
CAB39-206ENST00000493540 ERVK-21P61565 698 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 SEC23AQ15436 765 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 CCDC85BQ15834 202 aaPredicted RBP8.19□□□□□ -1.1
CAB39-206ENST00000493540 QRICH1Q2TAL8 776 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 EML3Q32P44 896 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 ASPRV1Q53RT3 343 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 KRT40Q6A162 431 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 STOX1Q6ZVD7 989 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 NOL8Q76FK4 1167 aaKnown RBP8.19□□□□□ -1.1
CAB39-206ENST00000493540 LRRC8DQ7L1W4 858 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 DEFB128Q7Z7B8 93 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 SERINC5Q86VE9 423 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 SAMD3Q8N6K7 520 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 CCDC155Q8N6L0 562 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 AFG1LQ8WV93 481 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 TBC1D5Q92609 795 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 HPS1Q92902 700 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 ZNF775Q96BV0 537 aaPredicted RBP8.19□□□□□ -1.1
CAB39-206ENST00000493540 C1QTNF1Q9BXJ1 281 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 IL25Q9H293 177 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 CPVLQ9H3G5 476 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 PXMP2Q9NR77 195 aa8.19□□□□□ -1.1
CAB39-206ENST00000493540 DDX41Q9UJV9 622 aaKnown RBP8.19□□□□□ -1.1
CAB39-206ENST00000493540 ABHD14A-ACY1A0A1B0GW23 586 aa8.18□□□□□ -1.1
CAB39-206ENST00000493540 LINC01553A4QN01 128 aa8.18□□□□□ -1.1
CAB39-206ENST00000493540 FAM187AA6NFU0 413 aa8.18□□□□□ -1.1
CAB39-206ENST00000493540 EFCAB14O75071 495 aa8.18□□□□□ -1.1
CAB39-206ENST00000493540 RFX1P22670 979 aa8.18□□□□□ -1.1
CAB39-206ENST00000493540 ADAM17P78536 824 aa8.18□□□□□ -1.1
CAB39-206ENST00000493540 PTK7Q13308 1070 aa8.18□□□□□ -1.1
CAB39-206ENST00000493540 PTGISQ16647 500 aa8.18□□□□□ -1.1
CAB39-206ENST00000493540 BRDTQ58F21 947 aaPredicted RBP8.18□□□□□ -1.1
CAB39-206ENST00000493540 OXLD1Q5BKU9 147 aa8.18□□□□□ -1.1
CAB39-206ENST00000493540 ADGRF4Q8IZF3 695 aa8.18□□□□□ -1.1
CAB39-206ENST00000493540 NSUN6Q8TEA1 469 aaKnown RBP8.18□□□□□ -1.1
CAB39-206ENST00000493540 PPP1R13LQ8WUF5 828 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms