RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ATP6V0A1Q93050 837 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 FAM167AQ96KS9 214 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 ZSCAN16Q9H4T2 348 aaPredicted RBP9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 NRBP2Q9NSY0 501 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 STK24Q9Y6E0 443 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 CEP290O15078 2479 aa9.16□□□□□ -0.94
TM4SF1-204ENST00000493348 EMSYQ7Z589 1322 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 GSTTP1A0A1W2PQM5 241 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 FAM205CA6NFA0 338 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 RRN3P2A6NIE6 340 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 LAD1O00515 517 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 OR52Z1P0C646 297 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 HOXD8P13378 290 aaPredicted RBP9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 PPFIA1Q13136 1202 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 SNX17Q15036 470 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 EARS2Q5JPH6 523 aaKnown RBP9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 TRMT1LQ7Z2T5 733 aaKnown RBP9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 ANKRD33Q7Z3H0 272 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 RSPH3Q86UC2 560 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 FERMT3Q86UX7 667 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 ETNPPLQ8TBG4 499 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 LENG9Q96B70 501 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 MBOAT7Q96N66 472 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 BCAS3Q9H6U6 928 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 TTC12Q9H892 705 aaPredicted RBP9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 GABBR1Q9UBS5 961 aa9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 ZMYND8Q9ULU4 1186 aaPredicted RBP9.15□□□□□ -0.94
TM4SF1-204ENST00000493348 NRCAMQ92823 1304 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 POTEB3A0JP26 581 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 KIF28PB7ZC32 967 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 M0QZ92 97 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 DHX15O43143 795 aaKnown RBP9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 HBP1O60381 514 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 PSMD10O75832 226 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 RPLP2P05387 115 aaKnown RBP9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 P4HBP07237 508 aaKnown RBP9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 SMIM10L2AP0DMW4 78 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 SMIM10L2BP0DMW5 78 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 SYN1P17600 705 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 CDK7P50613 346 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 IGBP1P78318 339 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 HAUS3Q68CZ6 603 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 POTEBQ6S5H4 581 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 ABHD15Q6UXT9 468 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 DTHD1Q6ZMT9 781 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 TRIM50Q86XT4 487 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 FAM126BQ8IXS8 530 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 TMEM199Q8N511 208 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 KAT2BQ92831 832 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 ZNF396Q96N95 335 aaPredicted RBP9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 C16orf70Q9BSU1 422 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 PPP1R12CQ9BZL4 782 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 UNC45AQ9H3U1 944 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 HIPK3Q9H422 1215 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 KCNMB3Q9NPA1 279 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 HDAC6Q9UBN7 1215 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 GTF2IRD1Q9UHL9 959 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 EVPLQ92817 2033 aa9.14□□□□□ -0.95
TM4SF1-204ENST00000493348 MYH15Q9Y2K3 1946 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 HAS3O00219 553 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 B4GALT4O60513 344 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 LGR5O75473 907 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 ATG7O95352 703 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 CCNE2O96020 404 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 TMOD1P28289 359 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 TECP42680 631 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 PSMC5P62195 406 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 PTK7Q13308 1070 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 PPP2R5CQ13362 524 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 EPHA7Q15375 998 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 GRIK4Q16099 956 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 ZNF484Q5JVG2 852 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 OTUD6AQ7L8S5 288 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 SESTD1Q86VW0 696 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 CCDC60Q8IWA6 550 aaPredicted RBP9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 EXOC8Q8IYI6 725 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 SLC43A3Q8NBI5 491 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 RASSF8Q8NHQ8 419 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 CAGE1Q8TC20 777 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 NEK9Q8TD19 979 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 AFAP1L1Q8TED9 768 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 ATP8B4Q8TF62 1192 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 BBXQ8WY36 941 aaPredicted RBP9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 GJA10Q969M2 543 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 CDK5RAP3Q96JB5 506 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 TRPV6Q9H1D0 765 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 PDLIM7Q9NR12 457 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 TRMT13Q9NUP7 481 aaKnown RBP9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 SETD4Q9NVD3 440 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 SEPT9Q9UHD8 586 aaPredicted RBP9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 TUBE1Q9UJT0 475 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 ATP6V1DQ9Y5K8 247 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 MKI67P46013 3256 aaKnown RBP9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 TNRC18O15417 2968 aaPredicted RBP9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 LOXHD1Q8IVV2 1947 aa9.13□□□□□ -0.95
TM4SF1-204ENST00000493348 COL1A2P08123 1366 aa9.12□□□□□ -0.95
TM4SF1-204ENST00000493348 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
TM4SF1-204ENST00000493348 H0YGN5 161 aa9.12□□□□□ -0.95
TM4SF1-204ENST00000493348 TIMP1P01033 207 aa9.12□□□□□ -0.95
TM4SF1-204ENST00000493348 OATP04181 439 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms