RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 PCDHA12Q9UN75 941 aa18.99■□□□□ 0.63
RER1-208ENST00000493207 EML1O00423 815 aa18.98■□□□□ 0.63
RER1-208ENST00000493207 TLR3O15455 904 aaKnown RBP18.98■□□□□ 0.63
RER1-208ENST00000493207 B4GALT4O60513 344 aa18.98■□□□□ 0.63
RER1-208ENST00000493207 SMIM10L2AP0DMW4 78 aa18.98■□□□□ 0.63
RER1-208ENST00000493207 SMIM10L2BP0DMW5 78 aa18.98■□□□□ 0.63
RER1-208ENST00000493207 PDIA4P13667 645 aaKnown RBP18.98■□□□□ 0.63
RER1-208ENST00000493207 PTPN11Q06124 597 aaPredicted RBP18.98■□□□□ 0.63
RER1-208ENST00000493207 SPIRE1Q08AE8 756 aa18.98■□□□□ 0.63
RER1-208ENST00000493207 PTGDRQ13258 359 aa18.98■□□□□ 0.63
RER1-208ENST00000493207 PKP1Q13835 747 aa18.98■□□□□ 0.63
RER1-208ENST00000493207 SESTD1Q86VW0 696 aa18.98■□□□□ 0.63
RER1-208ENST00000493207 C4orf32Q8N8J7 132 aa18.98■□□□□ 0.63
RER1-208ENST00000493207 RDM1Q8NG50 284 aa18.98■□□□□ 0.63
RER1-208ENST00000493207 AFAP1L1Q8TED9 768 aa18.98■□□□□ 0.63
RER1-208ENST00000493207 ZSCAN16Q9H4T2 348 aaPredicted RBP18.98■□□□□ 0.63
RER1-208ENST00000493207 TRMT13Q9NUP7 481 aaKnown RBP18.98■□□□□ 0.63
RER1-208ENST00000493207 KAT6AQ92794 2004 aa18.97■□□□□ 0.63
RER1-208ENST00000493207 CD4P01730 458 aa18.97■□□□□ 0.63
RER1-208ENST00000493207 CLTBP09497 229 aa18.97■□□□□ 0.63
RER1-208ENST00000493207 ZSCAN22P10073 491 aaPredicted RBP18.97■□□□□ 0.63
RER1-208ENST00000493207 ANP32AP39687 249 aaKnown RBP18.97■□□□□ 0.63
RER1-208ENST00000493207 FAAP100Q0VG06 881 aa18.97■□□□□ 0.63
RER1-208ENST00000493207 GDF6Q6KF10 455 aaPredicted RBP18.97■□□□□ 0.63
RER1-208ENST00000493207 PDXDC2PQ6P474 469 aa18.97■□□□□ 0.63
RER1-208ENST00000493207 FAM173BQ6P4H8 233 aa18.97■□□□□ 0.63
RER1-208ENST00000493207 PRDM5Q9NQX1 630 aaPredicted RBP18.97■□□□□ 0.63
RER1-208ENST00000493207 GTF2IRD1Q9UHL9 959 aa18.97■□□□□ 0.63
RER1-208ENST00000493207 TRIP12Q14669 1992 aaPredicted RBP18.97■□□□□ 0.63
RER1-208ENST00000493207 IGSF9BQ9UPX0 1349 aa18.97■□□□□ 0.63
RER1-208ENST00000493207 TECP42680 631 aa18.96■□□□□ 0.63
RER1-208ENST00000493207 HIC1Q14526 733 aa18.96■□□□□ 0.63
RER1-208ENST00000493207 PLCB4Q15147 1175 aa18.96■□□□□ 0.63
RER1-208ENST00000493207 UGCGQ16739 394 aa18.96■□□□□ 0.63
RER1-208ENST00000493207 TRMT1LQ7Z2T5 733 aaKnown RBP18.96■□□□□ 0.63
RER1-208ENST00000493207 CKAP2LQ8IYA6 745 aa18.96■□□□□ 0.63
RER1-208ENST00000493207 BANK1Q8NDB2 785 aa18.96■□□□□ 0.63
RER1-208ENST00000493207 PDLIM7Q9NR12 457 aa18.96■□□□□ 0.63
RER1-208ENST00000493207 TRPC6Q9Y210 931 aa18.96■□□□□ 0.63
RER1-208ENST00000493207 MAFBQ9Y5Q3 323 aaPredicted RBP18.96■□□□□ 0.63
RER1-208ENST00000493207 NR2E3Q9Y5X4 410 aa18.96■□□□□ 0.63
RER1-208ENST00000493207 POTEB3A0JP26 581 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 C17orf102A2RUQ5 167 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 POTEMA6NI47 508 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 LAD1O00515 517 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 F13A1P00488 732 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 SYN1P17600 705 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 ATP4AP20648 1035 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 SLC26A2P50443 739 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 ZNF200P98182 395 aaPredicted RBP18.95■□□□□ 0.62
RER1-208ENST00000493207 PTGISQ16647 500 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 TMEM266Q2M3C6 531 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 POTEBQ6S5H4 581 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 SH3RF1Q7Z6J0 888 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 FTOQ9C0B1 505 aaKnown RBP eCLIP18.95■□□□□ 0.624e-16■■□□□ 13.3
RER1-208ENST00000493207 TMEM39AQ9NV64 488 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 SETD4Q9NVD3 440 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 PCDH10Q9P2E7 1040 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 ZMYND8Q9ULU4 1186 aaPredicted RBP18.95■□□□□ 0.62
RER1-208ENST00000493207 NOD1Q9Y239 953 aa18.95■□□□□ 0.62
RER1-208ENST00000493207 TRIM43BA6NCK2 446 aa18.94■□□□□ 0.62
RER1-208ENST00000493207 ATP2C1P98194 919 aaPredicted RBP18.94■□□□□ 0.62
RER1-208ENST00000493207 PPFIA1Q13136 1202 aa18.94■□□□□ 0.62
RER1-208ENST00000493207 EPHA7Q15375 998 aa18.94■□□□□ 0.62
RER1-208ENST00000493207 SF3A1Q15459 793 aaKnown RBP18.94■□□□□ 0.62
RER1-208ENST00000493207 ATP8B4Q8TF62 1192 aa18.94■□□□□ 0.62
RER1-208ENST00000493207 LMBR1Q8WVP7 490 aa18.94■□□□□ 0.62
RER1-208ENST00000493207 ATP6V0A1Q93050 837 aa18.94■□□□□ 0.62
RER1-208ENST00000493207 TRIM43Q96BQ3 446 aaPredicted RBP18.94■□□□□ 0.62
RER1-208ENST00000493207 PRKAG2Q9UGJ0 569 aa18.94■□□□□ 0.62
RER1-208ENST00000493207 CLIC4Q9Y696 253 aa18.94■□□□□ 0.62
RER1-208ENST00000493207 LTBP2Q14767 1821 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 ZNF862O60290 1169 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 CYP2C9P11712 490 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 INSRRP14616 1297 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 HOXC8P31273 242 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 PRPHP41219 470 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 IGBP1P78318 339 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 PRKCEQ02156 737 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 GRIK4Q16099 956 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 DYDC2Q96IM9 177 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 CTAGE1Q96RT6 745 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 CEP131Q9UPN4 1083 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 NRCAMQ92823 1304 aa18.93■□□□□ 0.62
RER1-208ENST00000493207 TREHO43280 583 aa18.92■□□□□ 0.62
RER1-208ENST00000493207 HBP1O60381 514 aa18.92■□□□□ 0.62
RER1-208ENST00000493207 OATP04181 439 aa18.92■□□□□ 0.62
RER1-208ENST00000493207 P4HBP07237 508 aaKnown RBP18.92■□□□□ 0.62
RER1-208ENST00000493207 GNAT1P11488 350 aa18.92■□□□□ 0.62
RER1-208ENST00000493207 QARSP47897 775 aaKnown RBP18.92■□□□□ 0.62
RER1-208ENST00000493207 FXR2P51116 673 aaKnown RBP eCLIP18.92■□□□□ 0.62
RER1-208ENST00000493207 PSMC5P62195 406 aa18.92■□□□□ 0.62
RER1-208ENST00000493207 CYP4A11Q02928 519 aa18.92■□□□□ 0.62
RER1-208ENST00000493207 CEBPZQ03701 1054 aaKnown RBP18.92■□□□□ 0.62
RER1-208ENST00000493207 IL17AQ16552 155 aa18.92■□□□□ 0.62
RER1-208ENST00000493207 FOXD4L6Q3SYB3 417 aaPredicted RBP18.92■□□□□ 0.62
RER1-208ENST00000493207 FOXD4L3Q6VB84 417 aaPredicted RBP18.92■□□□□ 0.62
RER1-208ENST00000493207 DTHD1Q6ZMT9 781 aa18.92■□□□□ 0.62
RER1-208ENST00000493207 TRAPPC12Q8WVT3 735 aa18.92■□□□□ 0.62
RER1-208ENST00000493207 BBXQ8WY36 941 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms