RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 IGBP1P78318 339 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 NHLH1Q02575 133 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 TAF2Q6P1X5 1199 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 XRRA1Q6P2D8 792 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 NLRX1Q86UT6 975 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 ZNF654Q8IZM8 581 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 CRIPAKQ8N1N5 446 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 CUL5Q93034 780 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 RRP36Q96EU6 259 aaKnown RBP15.76■□□□□ 0.11
SAMM50-204ENST00000493161 PCYT2Q99447 389 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 SPZ1Q9BXG8 430 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 LMAN2LQ9H0V9 348 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 LY9Q9HBG7 655 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 TUBE1Q9UJT0 475 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 PLAGL2Q9UPG8 496 aa15.76■□□□□ 0.11
SAMM50-204ENST00000493161 MRPL42Q9Y6G3 142 aaKnown RBP15.76■□□□□ 0.11
SAMM50-204ENST00000493161 TRIOO75962 3097 aa15.75■□□□□ 0.11
SAMM50-204ENST00000493161 hCG_1642624A0A1W2PR95 340 aa15.75■□□□□ 0.11
SAMM50-204ENST00000493161 NCK2O43639 380 aa15.75■□□□□ 0.11
SAMM50-204ENST00000493161 MMP1P03956 469 aa15.75■□□□□ 0.11
SAMM50-204ENST00000493161 ADAM15Q13444 863 aa15.75■□□□□ 0.11
SAMM50-204ENST00000493161 SART3Q15020 963 aaKnown RBP15.75■□□□□ 0.11
SAMM50-204ENST00000493161 UBE2SQ16763 222 aa15.75■□□□□ 0.11
SAMM50-204ENST00000493161 TSHZ1Q6ZSZ6 1077 aa15.75■□□□□ 0.11
SAMM50-204ENST00000493161 ADGRD2Q7Z7M1 963 aa15.75■□□□□ 0.11
SAMM50-204ENST00000493161 SRBD1Q8N5C6 995 aaKnown RBP15.75■□□□□ 0.11
SAMM50-204ENST00000493161 SEPT1Q8WYJ6 367 aa15.75■□□□□ 0.11
SAMM50-204ENST00000493161 GLG1Q92896 1179 aa15.75■□□□□ 0.11
SAMM50-204ENST00000493161 GPRASP2Q96D09 838 aa15.75■□□□□ 0.11
SAMM50-204ENST00000493161 FAM49AQ9H0Q0 323 aaPredicted RBP15.75■□□□□ 0.11
SAMM50-204ENST00000493161 ITGB1P05556 798 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 RXRAP19793 462 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 GATMP50440 423 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 MRPS6P82932 125 aaKnown RBP15.74■□□□□ 0.11
SAMM50-204ENST00000493161 TMEM62Q0P6H9 643 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 RSPH3Q86UC2 560 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 RAB11FIP4Q86YS3 637 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 RNF135Q8IUD6 432 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 GIMAP8Q8ND71 665 aaPredicted RBP15.74■□□□□ 0.11
SAMM50-204ENST00000493161 TRAPPC12Q8WVT3 735 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 PSTPIP2Q9H939 334 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 ERAP1Q9NZ08 941 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 CD207Q9UJ71 328 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 RWDD3Q9Y3V2 267 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 PCDHGC5Q9Y5F6 944 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 UBIAD1Q9Y5Z9 338 aa15.74■□□□□ 0.11
SAMM50-204ENST00000493161 TTC3P53804 2025 aa15.73■□□□□ 0.11
SAMM50-204ENST00000493161 KIAA1671Q9BY89 1806 aa15.73■□□□□ 0.11
SAMM50-204ENST00000493161 INSRRP14616 1297 aa15.73■□□□□ 0.11
SAMM50-204ENST00000493161 SMAD4Q13485 552 aaKnown RBP15.73■□□□□ 0.11
SAMM50-204ENST00000493161 MTMR1Q13613 665 aa15.73■□□□□ 0.11
SAMM50-204ENST00000493161 PAN2Q504Q3 1202 aaKnown RBP15.73■□□□□ 0.11
SAMM50-204ENST00000493161 HERC4Q5GLZ8 1057 aaPredicted RBP15.73■□□□□ 0.11
SAMM50-204ENST00000493161 CTCFLQ8NI51 663 aaPredicted RBP15.73■□□□□ 0.11
SAMM50-204ENST00000493161 SPPL3Q8TCT6 385 aa15.73■□□□□ 0.11
SAMM50-204ENST00000493161 MSLNLQ96KJ4 702 aa15.73■□□□□ 0.11
SAMM50-204ENST00000493161 MAP3K14Q99558 947 aa15.73■□□□□ 0.11
SAMM50-204ENST00000493161 UPF3BQ9BZI7 483 aaKnown RBP15.73■□□□□ 0.11
SAMM50-204ENST00000493161 CLEC1BQ9P126 229 aa15.73■□□□□ 0.11
SAMM50-204ENST00000493161 SEC63Q9UGP8 760 aaKnown RBP15.73■□□□□ 0.11
SAMM50-204ENST00000493161 KAT6AQ92794 2004 aa15.73■□□□□ 0.11
SAMM50-204ENST00000493161 PIEZO1Q92508 2521 aa15.72■□□□□ 0.11
SAMM50-204ENST00000493161 STXBP3O00186 592 aa15.72■□□□□ 0.11
SAMM50-204ENST00000493161 SGSM2O43147 1006 aa15.72■□□□□ 0.11
SAMM50-204ENST00000493161 DDAH1O94760 285 aa15.72■□□□□ 0.11
SAMM50-204ENST00000493161 KLHL23Q8NBE8 558 aa15.72■□□□□ 0.11
SAMM50-204ENST00000493161 RUFY2Q8WXA3 655 aa15.72■□□□□ 0.11
SAMM50-204ENST00000493161 MAP4K1Q92918 833 aa15.72■□□□□ 0.11
SAMM50-204ENST00000493161 PLVAPQ9BX97 442 aa15.72■□□□□ 0.11
SAMM50-204ENST00000493161 SMARCAD1Q9H4L7 1026 aa15.72■□□□□ 0.11
SAMM50-204ENST00000493161 JADE2Q9NQC1 790 aa15.72■□□□□ 0.11
SAMM50-204ENST00000493161 PADI3Q9ULW8 664 aa15.72■□□□□ 0.11
SAMM50-204ENST00000493161 PRC1O43663 620 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 SMARCA1P28370 1054 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 KIF5BP33176 963 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 NDUFV1P49821 464 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 RBM23Q86U06 439 aaKnown RBP15.71■□□□□ 0.11
SAMM50-204ENST00000493161 CMTR2Q8IYT2 770 aaKnown RBP15.71■□□□□ 0.11
SAMM50-204ENST00000493161 CCDC82Q8N4S0 544 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 CYP2W1Q8TAV3 490 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 P2RX5Q93086 422 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 CDHR1Q96JP9 859 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 PHOX2BQ99453 314 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 TMX1Q9H3N1 280 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 PCDHA6Q9UN73 950 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 PCDHA8Q9Y5H6 950 aa15.71■□□□□ 0.11
SAMM50-204ENST00000493161 RBM8AQ9Y5S9 174 aaKnown RBP15.71■□□□□ 0.11
SAMM50-204ENST00000493161 SH2B2O14492 632 aaPredicted RBP15.7■□□□□ 0.1
SAMM50-204ENST00000493161 PPFIA3O75145 1194 aa15.7■□□□□ 0.1
SAMM50-204ENST00000493161 EYA4O95677 639 aa15.7■□□□□ 0.1
SAMM50-204ENST00000493161 GLP2RO95838 553 aa15.7■□□□□ 0.1
SAMM50-204ENST00000493161 IBSPP21815 317 aaPredicted RBP15.7■□□□□ 0.1
SAMM50-204ENST00000493161 NRIP1P48552 1158 aa15.7■□□□□ 0.1
SAMM50-204ENST00000493161 RBM10P98175 930 aaKnown RBP15.7■□□□□ 0.1
SAMM50-204ENST00000493161 PLCB4Q15147 1175 aa15.7■□□□□ 0.1
SAMM50-204ENST00000493161 TMEM266Q2M3C6 531 aa15.7■□□□□ 0.1
SAMM50-204ENST00000493161 IER5Q5VY09 327 aa15.7■□□□□ 0.1
SAMM50-204ENST00000493161 NPAS4Q8IUM7 802 aa15.7■□□□□ 0.1
SAMM50-204ENST00000493161 POF1BQ8WVV4 589 aa15.7■□□□□ 0.1
SAMM50-204ENST00000493161 EDAQ92838 391 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms