RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 EPHA7Q15375 998 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 UGCGQ16739 394 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 TMEM266Q2M3C6 531 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 FBXO46Q6PJ61 603 aaPredicted RBP10.52□□□□□ -0.73
CSTF1-206ENST00000493039 CCDC60Q8IWA6 550 aaPredicted RBP10.52□□□□□ -0.73
CSTF1-206ENST00000493039 GIMAP8Q8ND71 665 aaPredicted RBP10.52□□□□□ -0.73
CSTF1-206ENST00000493039 ENGASEQ8NFI3 743 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 AK8Q96MA6 479 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 PNMA5Q96PV4 448 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 EIF2AK1Q9BQI3 630 aaKnown RBP10.52□□□□□ -0.73
CSTF1-206ENST00000493039 CCSER1Q9C0I3 900 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 DOCK5Q9H7D0 1870 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 NKRFO15226 690 aaKnown RBP eCLIP10.52□□□□□ -0.73
CSTF1-206ENST00000493039 ZNF862O60290 1169 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 LIG1P18858 919 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 ATP4AP20648 1035 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 NDUFA8P51970 172 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 NKX3-2P78367 333 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 CYP4A11Q02928 519 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 GRB10Q13322 594 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 SLC9C1Q4G0N8 1177 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 NAALADL2Q58DX5 795 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 MIER3Q7Z3K6 550 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 KCNK18Q7Z418 384 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 TLK2Q86UE8 772 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 PPTC7Q8NI37 304 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 GPT2Q8TD30 523 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 DYDC2Q96IM9 177 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 UNC93B1Q9H1C4 597 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 Q9Y3F1 56 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 PCDHA10Q9Y5I2 948 aa10.52□□□□□ -0.73
CSTF1-206ENST00000493039 WDR64B1ANS9 1081 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 ADAMTS4O75173 837 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 STBD1O95210 358 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 PGK1P00558 417 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 PFKFB1P16118 471 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 RPA1P27694 616 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 TCF7P36402 384 aaPredicted RBP10.51□□□□□ -0.73
CSTF1-206ENST00000493039 GJA9P57773 515 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 UBE2HP62256 183 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 PSMC6P62333 389 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 CTTNQ14247 550 aaKnown RBP10.51□□□□□ -0.73
CSTF1-206ENST00000493039 KARSQ15046 597 aaKnown RBP10.51□□□□□ -0.73
CSTF1-206ENST00000493039 NFKBIBQ15653 356 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 HYIQ5T013 277 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 SWSAP1Q6NVH7 229 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 TSHZ1Q6ZSZ6 1077 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 TRIM50Q86XT4 487 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 SMAP1Q8IYB5 467 aaPredicted RBP10.51□□□□□ -0.73
CSTF1-206ENST00000493039 SEPT1Q8WYJ6 367 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 PLIN2Q99541 437 aa10.51□□□□□ -0.73
CSTF1-206ENST00000493039 HMX1Q9NP08 348 aaPredicted RBP10.51□□□□□ -0.73
CSTF1-206ENST00000493039 PAK6Q9NQU5 681 aaPredicted RBP10.51□□□□□ -0.73
CSTF1-206ENST00000493039 DDX20Q9UHI6 824 aaKnown RBP10.51□□□□□ -0.73
CSTF1-206ENST00000493039 SYNRGQ9UMZ2 1314 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 POTEB3A0JP26 581 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 MYCP01106 439 aaPredicted RBP10.5□□□□□ -0.73
CSTF1-206ENST00000493039 SUPT20HL2P0C7V6 817 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 SFNP31947 248 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 BEX3Q00994 111 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 E2F4Q16254 413 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 CCSAPQ6IQ19 270 aaPredicted RBP10.5□□□□□ -0.73
CSTF1-206ENST00000493039 POTEBQ6S5H4 581 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 RINLQ6ZS11 566 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 CABP7Q86V35 215 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 FMR1NBQ8N0W7 255 aaPredicted RBP10.5□□□□□ -0.73
CSTF1-206ENST00000493039 FSIP1Q8NA03 581 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 BANK1Q8NDB2 785 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 OR6J1Q8NGC5 347 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 SNX29Q8TEQ0 813 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 ZNF333Q96JL9 665 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 C16orf70Q9BSU1 422 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 POLR3CQ9BUI4 534 aaPredicted RBP10.5□□□□□ -0.73
CSTF1-206ENST00000493039 RAB34Q9BZG1 259 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 UPF3AQ9H1J1 476 aaKnown RBP10.5□□□□□ -0.73
CSTF1-206ENST00000493039 KCNH3Q9ULD8 1083 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 MAFBQ9Y5Q3 323 aaPredicted RBP10.5□□□□□ -0.73
CSTF1-206ENST00000493039 PPFIA4O75335 1185 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 NR1I2O75469 434 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 LGR5O75473 907 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 MMP3P08254 477 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 UBA7P41226 1012 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 JAK3P52333 1124 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 PKN2Q16513 984 aaKnown RBP10.5□□□□□ -0.73
CSTF1-206ENST00000493039 CSPP1Q1MSJ5 1256 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 POTEGQ6S5H5 508 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 PDILTQ8N807 584 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 KLHDC9Q8NEP7 349 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 RDM1Q8NG50 284 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 MRPS27Q92552 414 aaKnown RBP10.5□□□□□ -0.73
CSTF1-206ENST00000493039 ARMC5Q96C12 935 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 BLOC1S4Q9NUP1 217 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 SAMM50Q9Y512 469 aa10.5□□□□□ -0.73
CSTF1-206ENST00000493039 TMEM150BA6NC51 233 aa10.49□□□□□ -0.73
CSTF1-206ENST00000493039 P4HBP07237 508 aaKnown RBP10.49□□□□□ -0.73
CSTF1-206ENST00000493039 RARBP10826 455 aa10.49□□□□□ -0.73
CSTF1-206ENST00000493039 PLCG1P19174 1290 aa10.49□□□□□ -0.73
CSTF1-206ENST00000493039 CCT6AP40227 531 aaKnown RBP10.49□□□□□ -0.73
CSTF1-206ENST00000493039 LONRF3Q496Y0 759 aa10.49□□□□□ -0.73
CSTF1-206ENST00000493039 TMEM119Q4V9L6 283 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms